| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3219 |
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| Symbol | kpsF |
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| ID | 6145537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3290253 |
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| End bp | 3291272 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641618052 |
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| Product | polysialic acid capsule expression protein KpsF |
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| Protein accession | YP_001745202 |
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| Protein GI | 170680699 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGTGG CATTATTTCC GTGCAAAGGA GCTGATATGT CTGAAAGACA TTTACCTGAT
GACCAGAGCA GTACTATCGA TCCATATCTA ATTACCTCTG TTCGCCAGAC TCTGGCAGAA
CAAGGCGCAG CATTACAAAA CTTGTCTAAA CAACTGGATT CCGGGCAGTA CCAGCGTGTC
CTTAATTTGA TAATGAACTG TAAAGGGCAC GTTATTCTTT CGGGAATGGG TAAATCAGGG
CATGTCGGTC GTAAAATGTC AGCGACGCTG GCCTCTACGG GTACGCCTAG TTTCTTTATT
CATCCTGCAG AAGCTTTCCA TGGCGATCTG GGCATGATTA CGCCTTACGA TCTTCTGATC
CTTATTTCTG CCAGCGGTGA AACGGATGAA ATCCTCAAGC TAGTTCCTTC ACTGAAAAAT
TTCGGCAACC GAATTATCGC CATTACCAAT AATGGAAATT CCACGCTGGC GAAAAATGCT
GATGCCGTGC TGGAACTCCA CATGGCGAAT GAAACCTGCC CGAATAATCT TGCACCAACA
ACGTCTACCA CGCTGACGAT GGCGATCGGC GATGCGCTGG CGATTGCCAT GATCCACCAA
CGCAAATTTA TGCCGAATGA TTTTGCGCGC TATCACCCGG GCGGTTCATT AGGTCGTCGC
CTGCTGACCC GCGTTGCTGA TGTCATGCAG CATGATGTTC CTGCGGTACA GCTGGATGCG
TCATTTAAAA CCGTGATTCA ACGTATCACC AGCGGATGCC AGGGAATGGT GATGGTAGAA
GACGCAGAAG GTGGGCTAGC GGGCATTATC ACCGACGGTG ACCTGCGTCG CTTTATGGAA
AAAGAGGATT CTCTGACATC CGCTACGGCT GCGCAGATGA TGACACGTGA ACCGCTGACG
CTACCGGAAG ACACCATGAT CATTGAAGCG GAAGAAAAAA TGCAAAAGCA CCGCGTCTCA
ACGTTATTGG TGACCAACAA GGCAAATAAA GTCACTGGCC TTGTGCGCAT TTTCGACTAA
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| Protein sequence | MTVALFPCKG ADMSERHLPD DQSSTIDPYL ITSVRQTLAE QGAALQNLSK QLDSGQYQRV
LNLIMNCKGH VILSGMGKSG HVGRKMSATL ASTGTPSFFI HPAEAFHGDL GMITPYDLLI
LISASGETDE ILKLVPSLKN FGNRIIAITN NGNSTLAKNA DAVLELHMAN ETCPNNLAPT
TSTTLTMAIG DALAIAMIHQ RKFMPNDFAR YHPGGSLGRR LLTRVADVMQ HDVPAVQLDA
SFKTVIQRIT SGCQGMVMVE DAEGGLAGII TDGDLRRFME KEDSLTSATA AQMMTREPLT
LPEDTMIIEA EEKMQKHRVS TLLVTNKANK VTGLVRIFD
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