Gene EcSMS35_3202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3202 
Symbol 
ID6145728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3280575 
End bp3281459 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content53% 
IMG OID641618035 
Productputative GTPase 
Protein accessionYP_001745185 
Protein GI170683026 
COG category[R] General function prediction only 
COG ID[COG3596] Predicted GTPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTCA GCCATTCTTC CCTCTCTGCA CAAGTAAAAT CATATCTGAC GTTTCTTCCT 
GAAGAAATTC GCCAGAAAAT CCTTGAACAT CTCCACGGTG TTATTCATTA CGAGCCCGTA
ATTGGCATTA TGGGTAAATC CGGCACCGGC AAAAGCAGTC TGTGTAATGC CATTTTTCAG
TCCCGTATCT GCGCCACGCA TCCCCTGAAC GGCTGCACCC GCCAGGCTCA TCGTCTTACC
CTGCAGCTCG GTGAACGCAG AATGACGCTG GTCGATATGC CCGGCATTGG TGAGACACCG
CAGCATGATC AGGAATACCG GGAGCTTTAC CGTCAGTTAC TGCCGGAACT GGATCTGATT
ATCTGGATCC TGCGGGCTGA TGAACGTGCG TATGCTGCTG ATATTGCCAT GCATCAGTTT
TTACTGAATG AAGGTGCAGA TCCCTCGCGT TTTCTGTTTG TTCTCAGCCA TGCCGATCGC
GTGTTTCCTG CTGAAGAATG GAACGACACA GAAAAATGCC CGTCCCGTCA GCAGGAACTC
TCACTGGCGA CAGTAACAGC CCGGGTGGCA ACCCTGTTCC CGTCATCATT TCCGGTACTC
TCCGTTGCCG CACCTGTCGG CTGGAATCTT CCGGCACTGG TGTCGCTGAT GATCCACGCA
CTGCCACCAC AGGCAACCAG CGCAGTTTAT TCACATATCC GGGGGGAAAA CCGCTCTGAA
CAGGCCCGGA AACACGCACA ACAAACTTTT GGTGACGCCA TCGGGAAAAG CTTTGACGCT
GCCGTTGCCC AATTCAGCTT TCCGGCCTGG ATGTTACAGC TTCTGCGTAA GGCCCGGGAC
CGCATTATCC ACTTGCTGGT CACACTGTGG GATCGTCTGT TCTGA
 
Protein sequence
MSFSHSSLSA QVKSYLTFLP EEIRQKILEH LHGVIHYEPV IGIMGKSGTG KSSLCNAIFQ 
SRICATHPLN GCTRQAHRLT LQLGERRMTL VDMPGIGETP QHDQEYRELY RQLLPELDLI
IWILRADERA YAADIAMHQF LLNEGADPSR FLFVLSHADR VFPAEEWNDT EKCPSRQQEL
SLATVTARVA TLFPSSFPVL SVAAPVGWNL PALVSLMIHA LPPQATSAVY SHIRGENRSE
QARKHAQQTF GDAIGKSFDA AVAQFSFPAW MLQLLRKARD RIIHLLVTLW DRLF