Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3119 |
Symbol | |
ID | 6143024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3207276 |
End bp | 3207551 |
Gene Length | 276 bp |
Protein Length | 91 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641617986 |
Product | IS1 transposase orfA |
Protein accession | YP_001745136 |
Protein GI | 170683540 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3677] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.435416 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTTCTG TTTCTATCAG CTGTCCCTCC TGTTCAGCTA CTGACGGGGT GGTGCGTAAC GGCAAAAGCA CCGCCGGACA TCAGCGCTAT CTCTGCTCTC ACTGCCGTAA AACATGGCAA CTGCAGTTCA CTTACACCGC TTCTCAACCC GGTACGCACC AGAAAATCAT TGATATGGCC ATGAATGGCG TTGGATGCCG GGCAACTGCC CGCATTATGG GCGTTGGCCT CAACACGATT TTACGTCACT TAAAAAACTC AGGCCGCAGT CGGTAA
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Protein sequence | MASVSISCPS CSATDGVVRN GKSTAGHQRY LCSHCRKTWQ LQFTYTASQP GTHQKIIDMA MNGVGCRATA RIMGVGLNTI LRHLKNSGRS R
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