| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3104 |
|---|
| Symbol | mutY |
|---|
| ID | 6146887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 3189820 |
|---|
| End bp | 3190872 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641617972 |
|---|
| Product | adenine DNA glycosylase |
|---|
| Protein accession | YP_001745123 |
|---|
| Protein GI | 170682894 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1194] A/G-specific DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.00400976 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCGT CGCAATTTTC AGCCCAGGTT CTGGACTGGT ACGATAAATA CGGGCGGAAA
ACGCTGCCCT GGCAAATTGA CAAGACGCCC TACAAAGTAT GGCTCTCAGA AGTGATGTTG
CAACAAACTC AGGTTGCGAC TGTTATCCCC TATTTTGAAC GCTTTATGGC GCGCTTCCCG
ACGGTGACCG ATCTCGCCAA TGCACCGCTG GATGAAGTTC TCCACTTGTG GACCGGGCTT
GGCTATTACG CCCGCGCGCG CAATCTGCAT AAAGCGGCAC AACAAGTGGC CACCTTACAC
AGCGGTAAAT TCCCGGAAAC CTTTGAAGAA GTCGCGGCGT TACCAGGCGT CGGGCGTTCT
ACCGCAGGCG CGATTCTCTC GCTTTCTCTG GGTAAGCACT TTCCGATTCT CGACGGTAAC
GTCAAACGGG TGCTGGCGCG CTGCTATGCT GTAAGCGGCT GGCCTGGGAA AAAAGAGGTC
GAGAATAAAC TGTGGAGTTT AAGCGAGCAG GTGACGCCCG CGGTTGGCGT GGAACGGTTT
AATCAGGCGA TGATGGATTT GGGCGCGATG ATTTGCACGC GCTCGAAGCC GAAATGTTCG
TTCTGTCCGC TACAAAACGG ATGTATTGCC ACCGCTAACA ATAGCTGGTC GCTTTATCCG
GGCAAAAAAC CGAAACAGAC GCTGCCGGAG CGTACTGGCT ACTTTCTGCT GTTACAGCAC
GAAGATGAAG TATTGCTGGC GCAGCGTCCG CCGAGCGGAT TGTGGGGCGG TTTATACTGT
TTCCCGCAGT TTGCCGACGA AGAAAGTTTG CGGCAATGGC TGGCGCAACG GCAGATTGTT
GCTGATAACC TGACGCAGCT GACCGCGTTT CGCCATACCT TCAGCCATTT CCACTTAGAT
ATTGTGCCTA TGTGGCTTCC CGTGTCGTCA TTCACCGGCT GCATGGATGA AGGCAATGCG
CTCTGGTATA ACTTAGCGCA ACCGCCGTCA GTTGGCCTGG CGGCTCCCGT GGAGCGTTTG
TTACAGCAGT TACGCACTGG CGCGCCGGTT TAG
|
|---|
| Protein sequence | MQASQFSAQV LDWYDKYGRK TLPWQIDKTP YKVWLSEVML QQTQVATVIP YFERFMARFP
TVTDLANAPL DEVLHLWTGL GYYARARNLH KAAQQVATLH SGKFPETFEE VAALPGVGRS
TAGAILSLSL GKHFPILDGN VKRVLARCYA VSGWPGKKEV ENKLWSLSEQ VTPAVGVERF
NQAMMDLGAM ICTRSKPKCS FCPLQNGCIA TANNSWSLYP GKKPKQTLPE RTGYFLLLQH
EDEVLLAQRP PSGLWGGLYC FPQFADEESL RQWLAQRQIV ADNLTQLTAF RHTFSHFHLD
IVPMWLPVSS FTGCMDEGNA LWYNLAQPPS VGLAAPVERL LQQLRTGAPV
|
|---|
| |