Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3103 |
Symbol | trmB |
ID | 6146837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3188940 |
End bp | 3189659 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641617971 |
Product | tRNA (guanine-N(7)-)-methyltransferase |
Protein accession | YP_001745122 |
Protein GI | 170682679 |
COG category | [R] General function prediction only |
COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.00219663 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAACG ACGTCATCTC ACCGGAATTT GATGAAAACG GCCGCCCACT GCGCCGTATC CGTAGTTTTG TGCGCCGCCA GGGGCGACTG ACAAAAGGCC AGGAACATGC GCTGGAAAAC TACTGGCCGG TGATGGGCGT TGAGTTCAGC GAAGATATGC TGGATTTCCC CGCGCTTTTT GGCCGAGAAG CGCCGGTGAC GCTTGAGATT GGTTTTGGCA TGGGGGCGTC GCTGGTGGCA ATGGCTAAAG ATCGCCCTGA GCAGGACTTC CTCGGCATTG AAGTGCATTC ACCGGGCGTT GGTGCGTGCC TGGCTTCTGC GCATGAAGAG GGCTTAAGCA ACCTGCGCGT GATGTGCCAC GATGCGGTTG AAGTGCTGCA TAAAATGATT CCTGACAATT CATTGCGCAT GGTGCAGCTC TTTTTTCCTG ACCCGTGGCA CAAAGCGCGC CATAATAAAC GCCGTATCGT TCAGGTGCCG TTTGCCGAAC TGGTAAAAAG CAAACTGCAG CTGGGGGGCG TATTCCATAT GGCGACCGAC TGGGAACCTT ATGCGGAACA TATGCTTGAA GTGATGTCTT CGATTGACGG TTATAAAAAC CTGTCAGAGA GCAATGATTA CGTGCCGCGT CCGGCATCAC GTCCGGTGAC GAAATTTGAA CAACGTGGTC ATCGTCTTGG TCACGGAGTA TGGGACTTAA TGTTCGAGAG GGTGAAATAA
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Protein sequence | MKNDVISPEF DENGRPLRRI RSFVRRQGRL TKGQEHALEN YWPVMGVEFS EDMLDFPALF GREAPVTLEI GFGMGASLVA MAKDRPEQDF LGIEVHSPGV GACLASAHEE GLSNLRVMCH DAVEVLHKMI PDNSLRMVQL FFPDPWHKAR HNKRRIVQVP FAELVKSKLQ LGGVFHMATD WEPYAEHMLE VMSSIDGYKN LSESNDYVPR PASRPVTKFE QRGHRLGHGV WDLMFERVK
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