Gene EcSMS35_3102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3102 
Symbol 
ID6144140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3188614 
End bp3188940 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content49% 
IMG OID641617970 
Producthypothetical protein 
Protein accessionYP_001745121 
Protein GI170682631 
COG category[S] Function unknown 
COG ID[COG3171] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.00303352 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAAGA ACCGTAGCCG TCGTCTGCGT AAAAAAATGC ACATCGACGA ATTCCAGGAA 
TTAGGATTTT CGGTGGCATG GCGATTCCCG GAAGGTACAT CGGAAGAACA GATTGATAAA
ACCGTTGATG ATTTTATTAA CGAGGTTATC GAACCGAACA AACTGGCCTT TGACGGCAGC
GGTTATCTGG CCTGGGAAGG TCTGATCTGC ATGCAGGAAA TCGGCAAATG CACCGAAGAA
CATCAGGCGA TTGTGCGTAA GTGGCTGGAA GAGCGCAAAC TGGATGAGGT ACGCACCAGC
GAACTTTTCG ACGTTTGGTG GGACTAA
 
Protein sequence
MAKNRSRRLR KKMHIDEFQE LGFSVAWRFP EGTSEEQIDK TVDDFINEVI EPNKLAFDGS 
GYLAWEGLIC MQEIGKCTEE HQAIVRKWLE ERKLDEVRTS ELFDVWWD