Gene EcSMS35_3086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3086 
SymbolsprT 
ID6145273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3176653 
End bp3177150 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content56% 
IMG OID641617954 
Producthypothetical protein 
Protein accessionYP_001745105 
Protein GI170682825 
COG category[S] Function unknown 
COG ID[COG3091] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0374593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.00021739 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAACAT CCCGTCTCCC TATCGCCATC CAACAGGCCG TTATGCGTCG CCTGCGGGAA 
AAGCTCGCCC AGGCCAACCT GAAGCTAGGG CGTAACTACC CGGAGCCAAA ACTCTCTTAC
ACCCAGCGCG GCACCTCCGC CGGAACAGCC TGGCTGGAAA GCTATGAAAT CCGCCTCAAT
CCCGTTTTGC TGTTGGAAAA CAGTGAAGCC TTTATTGAAG AAGTGGTGCC CCACGAACTG
GCACATTTGC TGGTATGGAA ACATTTCGGG CGCGTAGCGC CACATGGCAA AGAGTGGAAG
TGGATGATGG AAAGCGTGCT GGGCGTTCCC GCCCGTCGTA CGCATCAGTT CGAACTGCAA
TCCGTGCGCC GCAACACCTT CCCCTACCGC TGCAAGTGTC AGGAGCATCA GCTTACCGTA
CGCCGCCATA ATCGCGTAGT TCGTGGCGAG GCCGTCTATC GCTGTGTTCA CTGCGGTGAA
CAGCTGATTG CAAAGTAA
 
Protein sequence
MKTSRLPIAI QQAVMRRLRE KLAQANLKLG RNYPEPKLSY TQRGTSAGTA WLESYEIRLN 
PVLLLENSEA FIEEVVPHEL AHLLVWKHFG RVAPHGKEWK WMMESVLGVP ARRTHQFELQ
SVRRNTFPYR CKCQEHQLTV RRHNRVVRGE AVYRCVHCGE QLIAK