Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3086 |
Symbol | sprT |
ID | 6145273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 3176653 |
End bp | 3177150 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641617954 |
Product | hypothetical protein |
Protein accession | YP_001745105 |
Protein GI | 170682825 |
COG category | [S] Function unknown |
COG ID | [COG3091] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0374593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.00021739 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAACAT CCCGTCTCCC TATCGCCATC CAACAGGCCG TTATGCGTCG CCTGCGGGAA AAGCTCGCCC AGGCCAACCT GAAGCTAGGG CGTAACTACC CGGAGCCAAA ACTCTCTTAC ACCCAGCGCG GCACCTCCGC CGGAACAGCC TGGCTGGAAA GCTATGAAAT CCGCCTCAAT CCCGTTTTGC TGTTGGAAAA CAGTGAAGCC TTTATTGAAG AAGTGGTGCC CCACGAACTG GCACATTTGC TGGTATGGAA ACATTTCGGG CGCGTAGCGC CACATGGCAA AGAGTGGAAG TGGATGATGG AAAGCGTGCT GGGCGTTCCC GCCCGTCGTA CGCATCAGTT CGAACTGCAA TCCGTGCGCC GCAACACCTT CCCCTACCGC TGCAAGTGTC AGGAGCATCA GCTTACCGTA CGCCGCCATA ATCGCGTAGT TCGTGGCGAG GCCGTCTATC GCTGTGTTCA CTGCGGTGAA CAGCTGATTG CAAAGTAA
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Protein sequence | MKTSRLPIAI QQAVMRRLRE KLAQANLKLG RNYPEPKLSY TQRGTSAGTA WLESYEIRLN PVLLLENSEA FIEEVVPHEL AHLLVWKHFG RVAPHGKEWK WMMESVLGVP ARRTHQFELQ SVRRNTFPYR CKCQEHQLTV RRHNRVVRGE AVYRCVHCGE QLIAK
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