| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3047 |
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| Symbol | rpiA |
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| ID | 6142864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3136444 |
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| End bp | 3137103 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641617916 |
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| Product | ribose-5-phosphate isomerase A |
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| Protein accession | YP_001745067 |
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| Protein GI | 170684222 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0120] Ribose 5-phosphate isomerase |
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| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00457435 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGCAGG ATGAATTGAA AAAAGCAGTA GGATGGGCGG CACTTCAGTA TGTTCAGCCC
GGCACCATTG TTGGTGTAGG TACAGGTTCC ACCGCCGCAC ACTTTATTGA CGCGCTCGGC
ACGATGAAAG GCCAGATTGA AGGGGCCGTT TCCAGTTCAG ATGCTTCCAC TGAAAAACTG
AAAAGCCTCG GCATTCACGT TTTTGATCTC AACGAAGTCG ACAGCCTTGG CATCTACGTT
GATGGCGCAG ATGAAATCAA CGGCCACATG CAAATGATCA AAGGCGGCGG TGCGGCGCTG
ACCCGTGAAA AAATCATTGC TTCGGTTGCG GAAAAATTTA TCTGTATTGC CGACGCCTCC
AAGCAGGTTG ATATTCTGGG CAAATTCCCG CTGCCAGTAG AAGTTATCCC GATGGCACGT
AGTGCAGTGG CGCGCCAGCT GGTGAAACTG GGCGGTCGTC CGGAATACCG CCAGGGCGTG
GTGACCGATA ACGGCAACGT GATCCTCGAC GTCCACGGCA TGGAAATCCT TGACCCGATA
GCGATGGAAA ACGCCATAAA TGCGATTCCT GGCGTGGTGA CTGTTGGCTT GTTTGCTAAC
CGTGGCGCGG ACGTTGCGCT GATTGGCACA CCTGACGGTG TCAAAACCAT TGTGAAATGA
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| Protein sequence | MTQDELKKAV GWAALQYVQP GTIVGVGTGS TAAHFIDALG TMKGQIEGAV SSSDASTEKL
KSLGIHVFDL NEVDSLGIYV DGADEINGHM QMIKGGGAAL TREKIIASVA EKFICIADAS
KQVDILGKFP LPVEVIPMAR SAVARQLVKL GGRPEYRQGV VTDNGNVILD VHGMEILDPI
AMENAINAIP GVVTVGLFAN RGADVALIGT PDGVKTIVK
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