| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3019 |
|---|
| Symbol | aegA2 |
|---|
| ID | 6145012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 3107813 |
|---|
| End bp | 3109747 |
|---|
| Gene Length | 1935 bp |
|---|
| Protein Length | 644 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641617888 |
|---|
| Product | putative oxidoreductase Fe-S binding subunit |
|---|
| Protein accession | YP_001745039 |
|---|
| Protein GI | 170683856 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG1142] Fe-S-cluster-containing hydrogenase components 2 |
|---|
| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGGA TGCAAATGAA TAAGTTTATC GCTGCTGAAG CTGCGGAATG TATAGGCTGT
CATGCTTGTG AAATTGCCTG TGCGATGGCA CATAATCAAG AAAACTGGCC GCTGAGTCAC
AGTGACTTTC GACCGCGTAT CCACGTTGTA GGGAAAGGCC AGGCTGCGAA TCCGGTGGCC
TGCCATCACT GCAACAATGC CCCTTGCGTT ACGGCTTGTC CGGTTAATGC TCTGACTTTC
CAGCCCGATA GCGTACAACT GGACGAGCAA AAATGTATTG GTTGTAAAAG ATGCGCAATC
GCTTGCTCCT TTGGCGTCGT TGAGATGGTC GATACGATTG CGCAGAAATG CGACCTTTGT
AACCAGCGCA GTTCCGGCAC GCAAGCCTGT ATTGAAGTCT GCCCAACACA GGCGTTACGG
CTGATGGACG ATAAAGGGTT GCAGCAGATA AAGGTGGCCC GCCAGCGCAA AACGGCAGCA
GGAAAAGCGT CATCAGACGC TCAGCCATCT CGCAGTGCAG CGTTGCTCCC CGTTAACTCG
CGTAAAGGCG CAGATAACAT TTCAGCGAGT GAACGGAAAA CCCACTTTGG CGAAATCTAT
TACGGGCTGG ATCCACAACA AGCGACTTAT GAGAGTGACC GCTGTGTTTA TTGCGCCGAA
AAAGCTAACT GCAACTGGCA TTGCCCGCTG CATAACGCTA TTCCGGATTA CATCCGTCTG
GTGCAGGAAG GAAAGATTAT TGAAGCGGCA GAACTTTGCC ACCAGACCAG TTCCTTACCA
GAAATCTGCG GCAGGGTATG TCCACAGGAC CGTCTTTGTG AAGGCGCATG TACTTTGAAA
GATCACTCTG GCGCAGTCTC TATCGGGAAT CTGGAACGCT ACATCACCGA TACCGCGCTG
GCGATGGGCT GGCGTCCCGA TGTCAGCAAA GTTGTTCCCC GTATCGAAAA AGTGGCGGTG
ATTGGCGCAG GGCCTGCAGG GTTAGGGTGT GCTGATATTC TGGCGCGCGC AGGAGTTCAG
GTTGATGTCT TTGATCGCCA TCCAGAAATT GGCGGTATGC TGACTTTTGG CATACCTCCT
TTCAAACTCG ATAAAACGGT ATTAAGCCAG CGGCGAGAGA TATTCACCGC AATGGGAATC
GACTTTCATC TTAACTGTGA AATTGGCCGC GATATTACCT TTAGCGATTT AACTTCTGAA
TATGATGCAG TTTTCATCGG CGTGGGGACT TACGGGATGA TGCGAGCAGA TCTGCCGCAT
GAAGATGCGC CCGGTGTCAT TCAGGCTCTA CCGTTCCTGA CTGCCCATAC CCGCCAGCTC
ATGGGGTTGC CGGAGTCTGA AGAGTATCCG CTGACGGATG TGGAAGGTAA GCGAGTCGTG
GTATTGGGCG GTGGCGATAC GACCATGGAT TGTTTGCGGA CCTCCATCCG CCTCAATGCC
GCCAGCGTGA CCTGCGCGTA TCGTCGTGAT GAAGTCAGTA TGCCGGGCTC GCGCAAAGAG
GTGGTCAATG CGCGCGAGGA AGGTGTCGAG TTTCAGTTCA ATGTTCAGCC GCAATATATC
GCTTGTGACG AAGATGGGCG TTTAACTGCA GTGGGCCTGA TTCGTACCGC CATGGGGGAG
CCGGGGCCGG ATGGTCGCCG TCGTCCTCGT CCGGTAGCGG GTTCAGAGTT TGAATTGCCC
GCCGATGTTC TCATTATGGC CTTTGGTTTC CAGGCGCATG CCATGCCGTG GTTGCAGGGC
AGCGGAATTA AACTCGATAA ATGGGGCCTG ATTCAAACCG GTGACGTCGG GTATTTACCT
ACCCAGACGC ATCTGAAAAA AGTCTTTGCT GGTGGTGATG CAGTTCATGG CGCGGATCTG
GTTGTCACTG CAATGGCCGC AGGAAGGCAG GCGGCGCGCG ATATGTTAAC TCTGTTTGAT
ACGAAGGCAT CGTGA
|
|---|
| Protein sequence | MKGMQMNKFI AAEAAECIGC HACEIACAMA HNQENWPLSH SDFRPRIHVV GKGQAANPVA
CHHCNNAPCV TACPVNALTF QPDSVQLDEQ KCIGCKRCAI ACSFGVVEMV DTIAQKCDLC
NQRSSGTQAC IEVCPTQALR LMDDKGLQQI KVARQRKTAA GKASSDAQPS RSAALLPVNS
RKGADNISAS ERKTHFGEIY YGLDPQQATY ESDRCVYCAE KANCNWHCPL HNAIPDYIRL
VQEGKIIEAA ELCHQTSSLP EICGRVCPQD RLCEGACTLK DHSGAVSIGN LERYITDTAL
AMGWRPDVSK VVPRIEKVAV IGAGPAGLGC ADILARAGVQ VDVFDRHPEI GGMLTFGIPP
FKLDKTVLSQ RREIFTAMGI DFHLNCEIGR DITFSDLTSE YDAVFIGVGT YGMMRADLPH
EDAPGVIQAL PFLTAHTRQL MGLPESEEYP LTDVEGKRVV VLGGGDTTMD CLRTSIRLNA
ASVTCAYRRD EVSMPGSRKE VVNAREEGVE FQFNVQPQYI ACDEDGRLTA VGLIRTAMGE
PGPDGRRRPR PVAGSEFELP ADVLIMAFGF QAHAMPWLQG SGIKLDKWGL IQTGDVGYLP
TQTHLKKVFA GGDAVHGADL VVTAMAAGRQ AARDMLTLFD TKAS
|
|---|
| |