Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2962 |
Symbol | |
ID | 6147508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3035306 |
End bp | 3036130 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641617831 |
Product | putative transcriptional antiterminator |
Protein accession | YP_001744983 |
Protein GI | 170680940 |
COG category | [K] Transcription |
COG ID | [COG3711] Transcriptional antiterminator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATCG AAAAAGTCAT GAACAATAAT TGTGTACAGG CATCGATGAA TGGACAGGAG GTTATCATTT CTGGGCCTGG CGTCGGTTAC AACAAAAAAT ATGGAATGTC GGTCCCTGAG CATCCGGCTA ACCGGATTTT TTATGTCAGA AATGAACAAA AAAATAAACT CTACAAATTG ATTGAACATG TGGATATTGA GTATGTTTTT GTTGCCGAAA AAATAGTGCA ATATGCGGAG AACAATCTCG AAAAAAATCT CAATCCATCG CTACTATTGA TTCTTGCTGA TCACATTTCG AATGCAATAT CCCGAGTCGC TTCAGGCATA CAAATTAATA ATGTTTTCCT TGATGAAATC AAAGCGTTGT ACAAAGCAGA GTATGCGATA AGTCGCGATG CATTAACTAT CATTAATGAG CAATTCAGCG TTCAACTTCC TGATGATGAG ATTGGTTTTA TAGCATTGCA TATTTTAAAT AATTATGAAA ATTCAGTTGA TTATGAATCA GTACGGATTA TTGAGTTGTC GCAAATAATC ACGGGGCTTA TTGAAGTTGT TTATAACAGA AAGGTGGACA GAAGTTCATT TAATTATTCC AGGTTCATGA TACACCTTAA ATATTTTTCA AGTCGCGTAT TATGTAATGA AAAGATAAAA CAAAAAGATA TTGGTGACAT CTATGAGCAG TTTCTTGAGA AAGACATCCT GTTACAGCGC GCAATTCATG AAATTGAACG GTATCTGTAT GCCACTTTTA AATATGAATT AATTTTAGAA GAAAAACTAT ATCTCTCAAT TCGTACCAAA GTATTAATGG ACTAA
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Protein sequence | MIIEKVMNNN CVQASMNGQE VIISGPGVGY NKKYGMSVPE HPANRIFYVR NEQKNKLYKL IEHVDIEYVF VAEKIVQYAE NNLEKNLNPS LLLILADHIS NAISRVASGI QINNVFLDEI KALYKAEYAI SRDALTIINE QFSVQLPDDE IGFIALHILN NYENSVDYES VRIIELSQII TGLIEVVYNR KVDRSSFNYS RFMIHLKYFS SRVLCNEKIK QKDIGDIYEQ FLEKDILLQR AIHEIERYLY ATFKYELILE EKLYLSIRTK VLMD
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