Gene EcSMS35_2962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2962 
Symbol 
ID6147508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3035306 
End bp3036130 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content34% 
IMG OID641617831 
Productputative transcriptional antiterminator 
Protein accessionYP_001744983 
Protein GI170680940 
COG category[K] Transcription 
COG ID[COG3711] Transcriptional antiterminator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATCG AAAAAGTCAT GAACAATAAT TGTGTACAGG CATCGATGAA TGGACAGGAG 
GTTATCATTT CTGGGCCTGG CGTCGGTTAC AACAAAAAAT ATGGAATGTC GGTCCCTGAG
CATCCGGCTA ACCGGATTTT TTATGTCAGA AATGAACAAA AAAATAAACT CTACAAATTG
ATTGAACATG TGGATATTGA GTATGTTTTT GTTGCCGAAA AAATAGTGCA ATATGCGGAG
AACAATCTCG AAAAAAATCT CAATCCATCG CTACTATTGA TTCTTGCTGA TCACATTTCG
AATGCAATAT CCCGAGTCGC TTCAGGCATA CAAATTAATA ATGTTTTCCT TGATGAAATC
AAAGCGTTGT ACAAAGCAGA GTATGCGATA AGTCGCGATG CATTAACTAT CATTAATGAG
CAATTCAGCG TTCAACTTCC TGATGATGAG ATTGGTTTTA TAGCATTGCA TATTTTAAAT
AATTATGAAA ATTCAGTTGA TTATGAATCA GTACGGATTA TTGAGTTGTC GCAAATAATC
ACGGGGCTTA TTGAAGTTGT TTATAACAGA AAGGTGGACA GAAGTTCATT TAATTATTCC
AGGTTCATGA TACACCTTAA ATATTTTTCA AGTCGCGTAT TATGTAATGA AAAGATAAAA
CAAAAAGATA TTGGTGACAT CTATGAGCAG TTTCTTGAGA AAGACATCCT GTTACAGCGC
GCAATTCATG AAATTGAACG GTATCTGTAT GCCACTTTTA AATATGAATT AATTTTAGAA
GAAAAACTAT ATCTCTCAAT TCGTACCAAA GTATTAATGG ACTAA
 
Protein sequence
MIIEKVMNNN CVQASMNGQE VIISGPGVGY NKKYGMSVPE HPANRIFYVR NEQKNKLYKL 
IEHVDIEYVF VAEKIVQYAE NNLEKNLNPS LLLILADHIS NAISRVASGI QINNVFLDEI
KALYKAEYAI SRDALTIINE QFSVQLPDDE IGFIALHILN NYENSVDYES VRIIELSQII
TGLIEVVYNR KVDRSSFNYS RFMIHLKYFS SRVLCNEKIK QKDIGDIYEQ FLEKDILLQR
AIHEIERYLY ATFKYELILE EKLYLSIRTK VLMD