| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2949 |
|---|
| Symbol | gcvA |
|---|
| ID | 6143453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 3024949 |
|---|
| End bp | 3025866 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641617818 |
|---|
| Product | DNA-binding transcriptional activator GcvA |
|---|
| Protein accession | YP_001744973 |
|---|
| Protein GI | 170681756 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000549414 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAAAC GATTACCACC GCTAAATGCC TTACGAGTTT TTGATGCCGC AGCACGCCAT
TTAAGTTTCA CTCGCGCAGC AGAAGAGCTT TTTGTGACCC AGGCCGCAGT AAGTCATCAA
ATCAAGTCTC TTGAGGATTT TTTGGGGCTA AAACTGTTCC GCCGCCGTAA TCGTTCACTC
CTGCTGACCG AGGAAGGGCA AAGCTATTTC CTCGATATCA AAGAGATATT TTCGCAATTA
ACCGAAGCGA CGCGTAAACT CCAGGCCCGT AGCGCTAAGG GGGCGTTGAC GGTCAGTTTA
CTCCCCAGTT TCGCCATTCA TTGGTTGGTT CCGCGACTTT CCAGCTTTAA TTCAGCTTAT
CCGGGAATTG ACGTTCGAAT CCAGGCGGTT GATCGTCAGG AAGATAAGCT GGCGGATGAT
GTTGATGTGG CGATATTTTA TGGTCGGGGC AACTGGCCGG GGCTACGGGT GGAAAAACTG
TACGCCGAAT ATTTATTGCC GGTGTGCTCG CCGCTACTGC TGACTGGCGA AAAACCCTTG
AAGACCCCGG AAGATCTGGC TAAACATACG TTATTACATG ATGCGTCACG CCGTGACTGG
CAGACATATA CCCGACAGTT GGGGTTAAAT CATATCAACG TTCAGCAAGG GCCAATTTTT
AGCCATAGCG CCATGGTGCT GCAAGCGGCT ATCCACGGGC AGGGAGTGGC GCTGGCAAAT
AACGTGATGG CGCAATCTGA AATTGAAGCC GGACGTCTTG TTTGCCCGTT TAATGATGTT
CTGGTCAGTA AAAACGCTTT TTATCTGGTT TGTCATGACA GCCAGGCAGA ACTGGGTAAA
ATAGCCGCCT TTCGCCAATG GATCCTGGCG AAAGCCGCTG CTGAACAAGA AAAATTCCGC
TTTCGTTATG AACAATAA
|
|---|
| Protein sequence | MSKRLPPLNA LRVFDAAARH LSFTRAAEEL FVTQAAVSHQ IKSLEDFLGL KLFRRRNRSL
LLTEEGQSYF LDIKEIFSQL TEATRKLQAR SAKGALTVSL LPSFAIHWLV PRLSSFNSAY
PGIDVRIQAV DRQEDKLADD VDVAIFYGRG NWPGLRVEKL YAEYLLPVCS PLLLTGEKPL
KTPEDLAKHT LLHDASRRDW QTYTRQLGLN HINVQQGPIF SHSAMVLQAA IHGQGVALAN
NVMAQSEIEA GRLVCPFNDV LVSKNAFYLV CHDSQAELGK IAAFRQWILA KAAAEQEKFR
FRYEQ
|
|---|
| |