Gene EcSMS35_2936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2936 
Symbol 
ID6144549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3011479 
End bp3012768 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content52% 
IMG OID641617805 
Productserine transporter family protein 
Protein accessionYP_001744960 
Protein GI170683290 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00814] serine transporter 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0834253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGA CTCAAACCAG CACGATTGCG TCGAAAGACT CTCGTAGTGC CTGGCGCAAG 
ACAGACACCA TGTGGATGCT GGGCCTTTAC GGCACGGCAA TCGGCGCGGG CGTGCTGTTC
CTGCCAATCA ACGCCGGTGT TGGCGGTATG ATCCCGCTGA TCATCATGGC TATCCTTGCG
TTCCCGATGA CATTTTTTGC TCACCGCGGC CTGACTCGCT TCGTACTGTC TGGTAAAAAC
CCAGGCGAAG ACATCACCGA GGTTGTAGAA GAACACTTTG GTATTGGCGC AGGTAAACTG
ATTACCCTGC TCTACTTCTT CGCTATCTAC CCGATCCTGC TGGTTTATAG CGTGGCAATC
ACCAATACAG TTGAAAGCTT CATGTCTCAC CAGCTGGGTA TGACACCACC GCCGCGTGCG
ATTCTGTCGC TGATCCTGAT CGTGGGTATG ATGACCATCG TTCGCTTCGG TGAGCAGATG
ATCGTTAAAG CGATGAGCAT TCTGGTATTC CCGTTTGTTG GCGTACTGAT GCTGCTGGCT
CTGTACCTGA TCCCGCAGTG GAACGGCGCA GCACTGGAAA CACTGTCTCT GGACACTGCA
TCTGCAACCG GAAACGGTCT GTGGATGACC CTGTGGCTGG CAATTCCGGT AATGGTGTTC
TCGTTCAACC ACTCTCCGAT CATCTCTTCT TTCGCCGTTG CGAAGCGTGA AGAGTACGGC
GATATGGCAG AACAGAAATG CTCTAAGATC CTGGCATTCG CACACATCAT GATGGTGCTG
ACCGTAATGT TCTTCGTCTT CAGCTGCGTA CTGAGCCTGA CTCCGGCAGA CCTGGCTGCG
GCTAAAGAGC AGAACATCTC GATTCTGTCT TACCTGGCTA ACCACTTTAA CGCGCCGATC
ATCGCGTGGA TGGCTCCGAT TATCGCGATT ATCGCTATCA CCAAATCCTT CCTCGGCCAC
TACCTGGGCG CACGTGAAGG CTTCAACGGT ATGGTGATTA AATCTCTGCG TGGTAAAGGT
AAGTCTATCG AAATCAACAA GCTGAACCGT ATCACTGCGC TGTTCATGCT GGTAACGACC
TGGATTGTTG CCACCCTGAA CCCGAGCATC CTGGGTATGA TTGAAACCCT GGGCGGCCCA
ATCATCGCGA TGATCCTGTT CCTGATGCCG ATGTACGCAA TTCAGAAAGT ACCGGCAATG
CGTAAGTACA GCGGTCACAT CAGCAACGTA TTCGTTGTCG TGATGGGTCT GATTGCAATC
TCCGCAATCT TCTACTCTCT GTTCAGCTAA
 
Protein sequence
METTQTSTIA SKDSRSAWRK TDTMWMLGLY GTAIGAGVLF LPINAGVGGM IPLIIMAILA 
FPMTFFAHRG LTRFVLSGKN PGEDITEVVE EHFGIGAGKL ITLLYFFAIY PILLVYSVAI
TNTVESFMSH QLGMTPPPRA ILSLILIVGM MTIVRFGEQM IVKAMSILVF PFVGVLMLLA
LYLIPQWNGA ALETLSLDTA SATGNGLWMT LWLAIPVMVF SFNHSPIISS FAVAKREEYG
DMAEQKCSKI LAFAHIMMVL TVMFFVFSCV LSLTPADLAA AKEQNISILS YLANHFNAPI
IAWMAPIIAI IAITKSFLGH YLGAREGFNG MVIKSLRGKG KSIEINKLNR ITALFMLVTT
WIVATLNPSI LGMIETLGGP IIAMILFLMP MYAIQKVPAM RKYSGHISNV FVVVMGLIAI
SAIFYSLFS