| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2884 |
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| Symbol | cse3 |
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| ID | 6146023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2953516 |
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| End bp | 2954166 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641617753 |
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| Product | CRISPR-associated Cse3 family protein |
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| Protein accession | YP_001744908 |
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| Protein GI | 170681320 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.542217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACCTCT CAAGAATAAC CTTACATACC GGCCAGCTTT CGCCTGCGCA GTTGCTGCAT
CTGGTGGATC GCGGGGAATA TGTGATGCAT CAGTGGCTGT GGGATCTTTT TCCTGGCGGC
AAAGAAAGGC AATTTCTTTA TCGTCGGGAA GAACTCCAGG GCGCGTTTCG CTTTTTTGTC
CTGTCGCAGG AACGCCCGGC GGAAAGTGAA ACGTTCACCA TCGAATGCCG GTCATTTGCG
CCTGAACTGC ATACCGGACA ATCCCTTTGT TTCAACCTGC GGGCGAATCC AACAGTCTGT
AAAGCGGGTA AGCGCCACGA TCTGCTGATG GAGGCGAAAC GGCAGGTGAG GGGGCAGGCG
GAAGGAAGAA ATGTCTGGTT GCATCAACAA CAGGCGGCGC TGGACTGGCT GGCAGCGCAG
GGGGAGAGAA GCGGTTTTAC ACTGCTGGAT ACCTCGGTCG ATGCCTACCG ACAACAGCAA
CTGCGGCGGG AAAACTCCCG GCAACTGATC CAGTTCAGTA GCGTGGATTA TACAGGGATG
CTTACAGTCA CCGATCCAGG GTTATTTCTG CAACGTCTCT GCCTGGGGTA TGGCAAAAGC
CGGGCGTTCG GCTGTGGTCT GATGTTAATC AAACCCGGAG CAGAGGCGTG A
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| Protein sequence | MYLSRITLHT GQLSPAQLLH LVDRGEYVMH QWLWDLFPGG KERQFLYRRE ELQGAFRFFV
LSQERPAESE TFTIECRSFA PELHTGQSLC FNLRANPTVC KAGKRHDLLM EAKRQVRGQA
EGRNVWLHQQ QAALDWLAAQ GERSGFTLLD TSVDAYRQQQ LRRENSRQLI QFSSVDYTGM
LTVTDPGLFL QRLCLGYGKS RAFGCGLMLI KPGAEA
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