| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2883 |
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| Symbol | cas1 |
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| ID | 6143521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2952596 |
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| End bp | 2953519 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641617752 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_001744907 |
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| Protein GI | 170681830 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.921772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACGTTTG TACCACTGAG TCCGATCCCG TTAAAAGATC GCACATCTAT GATCTTCCTC
CAGTACGGTC AGGTCGACGT ACTGGACGGC GCTTTCGTGC TGATCGACAA AACCGGGATC
CGCACGCATA TTCCAGTGGG ATCGGTCGCC TGCATTATGC TCGAACCGGG AACAAGAGTT
TCCCACGCGG CAGTCCATCT GGCCGCCACG GTGGGAACAC TGCTGGTCTG GGTCGGTGAA
GCGGGCGTTC GCGTTTACTC CTCCGGACAA CCCGGAGGGG CGCGGGCAGA TAAATTACTC
TACCAGGCAA AGCTGGCTTT AACGGAAGAT CTACGGTTGA AGGTGGTGCG CAAAATGTAT
GAATTACGTT TTCGTGAACC ACCGCCAGCT CGCCGTTCAG TGGAGCAGTT ACGGGGAATT
GAGGGATCCC GTGTTCGCCA GACCTATGCA TTACTGGCGA AGCAATATGG TGTGAAATGG
AATGGTCGCA AATACGATCC TAAAGACTGG GAAAAAGGCG ATGTTGTCAA TCGCTGCATC
AGTGCTGCCA CATCATGCCT GTACGGTATA TCTGAAGCGG CGGTATTAGC CGCGGGATAT
GCGCCCGCTA TTGGATTTAT CCATAGTGGC AAACCGCTTT CATTTGTTTA TGACATAGCC
GATATCATTA AATTTGATTT GGTTGTGCCA AAGGCATTTG AAATAGCGGC AAGACACCCG
GCAGAACCTG ATAAAGAAGT GAGACTGGCC TGCCGTGATA TTTTCCGTAG TAGTAAATTA
ACGGGCAAAT TAATTCCGTT AATTGAGGAA GTCCTTGCCG CCGGTGAAAT TGAACCACCA
CAACCTGCGC CGGATATGTT ACCACCAGCT ATCCCGGAAC CTGAATTGCT AGGTGATAGT
GGTCACCGGG GGCGCAGCGG ATGA
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| Protein sequence | MTFVPLSPIP LKDRTSMIFL QYGQVDVLDG AFVLIDKTGI RTHIPVGSVA CIMLEPGTRV
SHAAVHLAAT VGTLLVWVGE AGVRVYSSGQ PGGARADKLL YQAKLALTED LRLKVVRKMY
ELRFREPPPA RRSVEQLRGI EGSRVRQTYA LLAKQYGVKW NGRKYDPKDW EKGDVVNRCI
SAATSCLYGI SEAAVLAAGY APAIGFIHSG KPLSFVYDIA DIIKFDLVVP KAFEIAARHP
AEPDKEVRLA CRDIFRSSKL TGKLIPLIEE VLAAGEIEPP QPAPDMLPPA IPEPELLGDS
GHRGRSG
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