| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2851 |
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| Symbol | hypA |
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| ID | 6146662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2926527 |
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| End bp | 2926889 |
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| Gene Length | 363 bp |
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| Protein Length | 120 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641617720 |
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| Product | hydrogenase nickel incorporation protein |
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| Protein accession | YP_001744875 |
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| Protein GI | 170682833 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
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| TIGRFAM ID | [TIGR00100] hydrogenase nickel insertion protein HypA |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.440089 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGAGGCG ATATGCACGA AATAACCCTC TGCCAACGGG CACTGGAATT GATCGAACAG
CAGGCCGCAA AACACGGCGC AAAACGCGTA ACTGGGGTCT GGCTCAAAAT TGGCGCATTT
TCTTGTGTCG AAACCAGCTC TCTTGCCTTT TGTTTTGATC TGGTTTGCCG CGGCAGCATG
GCGGAAGGTT GTAAACTGCA CCTCGAAGAA CAAGAGGCCG AATGCTGGTG TGAAACATGC
CAACAGTATG TGACGCTACT GACCCAGCGC GTCCGCCGCT GTCCACAGTG TCATGGTGAC
ATGCTACAGA TTGTGGCAGA CGACGGTTTA CAGATTCGGC GGATAGAAAT AGACCAGGAG
TGA
|
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| Protein sequence | MGGDMHEITL CQRALELIEQ QAAKHGAKRV TGVWLKIGAF SCVETSSLAF CFDLVCRGSM
AEGCKLHLEE QEAECWCETC QQYVTLLTQR VRRCPQCHGD MLQIVADDGL QIRRIEIDQE
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