| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2847 |
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| Symbol | hycD |
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| ID | 6146153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2922381 |
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| End bp | 2923304 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641617716 |
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| Product | formate hydrogenlyase, subunit D |
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| Protein accession | YP_001744871 |
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| Protein GI | 170681545 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0650] Formate hydrogenlyase subunit 4 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.115372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGTTT TATATCCGTT AATTCAGGCG CTGGTGTTAT TTGCCGTTGC GCCGCTGCTC
TCCGGTATAA CCCGCGTGGC GCGCGCCCGC TTGCATAACC GTCGCGGGCC GGGCGTGTTG
CAGGAGTATC GCGACATTAT CAAACTGCTG GGTCGCCAGA GCGTTGGCCC GGATGCCTCC
GGCTGGGTGT TCCGCCTGAC GCCGTATGTG ATGGTGGGCG TCATGCTGAC TATCGCCACT
GCGCTGCCGG TGGTGACCGT CGGTTCTCCG CTGCCGCAAC TGGGCGATTT GATCACCTTA
CTGTATCTCT TCGCCATCGC GCGTTTCTTC TTTGCCATTT CTGGTCTGGA TACCGGTAGC
CCGTTTACCG CTATCGGCGC GAGCCGTGAA GCGATGCTTG GCGTGTTGGT TGAACCGATG
CTGCTGCTTG GTCTGTGGGT CGCCGCACAG GTTGCCGGTT CCACCAACAT CAGCAACATC
ACCGACACCG TTTATCACTG GCCACTGAGC CAGAGCATCC CGCTGGTGCT GGCGCTTTGT
GCCTGTGCGT TCGCCACTTT TATCGAAATG GGCAAACTGC CGTTCGACCT GGCGGAAGCC
GAGCAGGAGT TGCAGGAAGG TCCGCTCTCT GAGTACAGCG GCAGCGGTTT TGGCGTCATG
AAATGGGGCA TCAGCCTGAA ACAGCTGGTG GTGTTGCAGA TGTTCGTCGG GGTGTTTATT
CCGTGGGGAC AAATGGAAAC CTTCACCGTC GGTGGGCTGC TGCTGGCACT GGTGATTGCC
ATCGTCAAAC TGGTGGTCGG CGTACTGGTT ATCGCGCTGT TCGAAAACAG CATGGCCCGT
CTGCGTCTTG ATATTACTCC GCGCATTACC TGGGCTGGGT TTGGCTTTGC ATTTTTAGCG
TTCGTCTCCT TGCTGGCGGC GTGA
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| Protein sequence | MSVLYPLIQA LVLFAVAPLL SGITRVARAR LHNRRGPGVL QEYRDIIKLL GRQSVGPDAS
GWVFRLTPYV MVGVMLTIAT ALPVVTVGSP LPQLGDLITL LYLFAIARFF FAISGLDTGS
PFTAIGASRE AMLGVLVEPM LLLGLWVAAQ VAGSTNISNI TDTVYHWPLS QSIPLVLALC
ACAFATFIEM GKLPFDLAEA EQELQEGPLS EYSGSGFGVM KWGISLKQLV VLQMFVGVFI
PWGQMETFTV GGLLLALVIA IVKLVVGVLV IALFENSMAR LRLDITPRIT WAGFGFAFLA
FVSLLAA
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