Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2818 |
Symbol | csrA |
ID | 6143707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2894185 |
End bp | 2894370 |
Gene Length | 186 bp |
Protein Length | 61 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641617687 |
Product | carbon storage regulator |
Protein accession | YP_001744842 |
Protein GI | 170682990 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000306437 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.000110428 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGATTC TGACTCGTCG AGTTGGTGAG ACCCTCATGA TTGGGGATGA GGTCACCGTG ACAGTTTTAG GGGTAAAGGG CAACCAGGTA CGTATTGGCG TAAATGCCCC GAAGGAAGTT TCTGTTCACC GTGAAGAGAT CTACCAGCGT ATCCAGGCTG AAAAATCCCA GCAGTCCAGT TACTAA
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Protein sequence | MLILTRRVGE TLMIGDEVTV TVLGVKGNQV RIGVNAPKEV SVHREEIYQR IQAEKSQQSS Y
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