| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2808 |
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| Symbol | emrB |
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| ID | 6146915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2888110 |
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| End bp | 2889648 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641617677 |
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| Product | multidrug resistance protein B |
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| Protein accession | YP_001744837 |
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| Protein GI | 170682086 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.001171 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.00961991 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAACAGC AAAAACCGCT GGAAGGCGCG CAACTGGTCA TTATGACGAT TGCGCTGTCA
CTGGCGACAT TCATGCAGGT GCTGGACTCC ACCATTGCTA ACGTGGCGAT CCCCACTATC
GCCGGGAATC TGGGCTCATC GCTCAGCCAG GGAACGTGGG TAATCACTTC TTTCGGGGTG
GCGAATGCCA TCTCGATCCC GCTTACCGGC TGGCTGGCAA AGCGCGTCGG GGAAGTGAAA
TTGTTCCTCT GGTCAACCAT CGCCTTTGCT ATTGCGTCGT GGGCGTGTGG TGTCTCCAGC
AGCCTGAATA TGCTGATCTT CTTCCGCGTG ATTCAGGGGA TTGTCGCCGG GCCGCTGATC
CCGCTTTCGC AAAGTCTATT GCTGAATAAC TACCCGCCAG CCAAACGCTC GATCGCGCTG
GCGTTGTGGT CGATGACGGT GATTGTTGCG CCAATTTGCG GTCCGATCCT CGGCGGTTAT
ATCAGTGATA ATTACCACTG GGGCTGGATA TTCTTCATCA ACGTGCCGAT TGGCGTGGCG
GTGGTGTTGA TGACACTGCA AACTCTGCGC GGACGTGAAA CCCGCACCGA ACGGCGGCGG
ATTGATGCCG TGGGGCTGGC ACTGCTGGTT ATTGGTATCG GCAGCCTGCA GATTATGCTC
GACCGCGGTA AAGAGCTGGA CTGGTTCTCA TCACAGGAAA TTATCATCCT CACCGTGGTG
GCGGTGGTGG CTATCTGCTT CCTGATTGTC TGGGAGCTGA CCGACGATAA CCCGATAGTC
GATCTGTCGT TGTTTAAGTC GCGCAACTTC ACCATCGGCT GCTTGTGTAT CAGCCTCGCG
TATATGCTCT ACTTCGGCGC GATTGTTCTG CTGCCGCAGT TGTTGCAGGA GGTCTACGGT
TACACGGCGA CGTGGGCAGG GCTGGCCTCT GCACCGGTAG GGATTATTCC GGTGATCCTG
TCGCCGATTA TCGGCCGCTT CGCGCATAAA CTGGATATGC GCCGACTGGT AACCTTCAGC
TTTATTATGT ATGCCGTCTG CTTCTACTGG CGTGCCTATA CCTTTGAACC GGGTATGGAT
TTTGGCGCGT CGGCCTGGCC GCAGTTTATC CAGGGTTTTG CGGTGGCCTG CTTCTTTATG
CCGCTAACCA CCATTACGCT GTCCGGTTTG CCACCGGAAC GACTGGCGGC AGCATCGAGC
CTCTCCAACT TTACGCGAAC GCTGGCGGGG TCTATCGGCA CATCGATAAC CACGACTATG
TGGACCAACC GCGAGTCGCT GCACCATGCG CAGTTGACTG AGTCGGTAAA CCCGTTCAAC
CCGAATGCCC AGGCGATGTA CAGTCAACTG GAAGGGCTTG GGATGACGCA ACAGCAGGCA
TCAGGCTGGA TTGCCCAGCA GATCACCAAT CAGGGGCTGA TTATTTCCGC CAATGAGATC
TTCTGGATGT CAGCCGGGAT ATTCCTCGTC TTGCTGGGGC TGGTGTGGTT TGCTAAACCG
CCATTTGGCG CAGGTGGCGG CGGAGGCGGT GCGCACTAA
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| Protein sequence | MQQQKPLEGA QLVIMTIALS LATFMQVLDS TIANVAIPTI AGNLGSSLSQ GTWVITSFGV
ANAISIPLTG WLAKRVGEVK LFLWSTIAFA IASWACGVSS SLNMLIFFRV IQGIVAGPLI
PLSQSLLLNN YPPAKRSIAL ALWSMTVIVA PICGPILGGY ISDNYHWGWI FFINVPIGVA
VVLMTLQTLR GRETRTERRR IDAVGLALLV IGIGSLQIML DRGKELDWFS SQEIIILTVV
AVVAICFLIV WELTDDNPIV DLSLFKSRNF TIGCLCISLA YMLYFGAIVL LPQLLQEVYG
YTATWAGLAS APVGIIPVIL SPIIGRFAHK LDMRRLVTFS FIMYAVCFYW RAYTFEPGMD
FGASAWPQFI QGFAVACFFM PLTTITLSGL PPERLAAASS LSNFTRTLAG SIGTSITTTM
WTNRESLHHA QLTESVNPFN PNAQAMYSQL EGLGMTQQQA SGWIAQQITN QGLIISANEI
FWMSAGIFLV LLGLVWFAKP PFGAGGGGGG AH
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