| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2798 |
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| Symbol | nrdF |
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| ID | 6142946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2878987 |
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| End bp | 2879946 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641617667 |
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| Product | ribonucleotide-diphosphate reductase subunit beta |
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| Protein accession | YP_001744827 |
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| Protein GI | 170684037 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.01423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTCT CTCGTATCAG CGCCATCAAC TGGAACAAGA TATCTGACGA TAAAGATCTG
GAGGTGTGGA ATCGCCTGAC CAGCAATTTC TGGCTACCAG AAAAGGTGCC ACTGTCGAAC
GATATACCTG CATGGCAGAC ATTAAGTGTC GTAGAACAAC AACTAACAAT GCGCGTTTTT
ACTGGCCTGA CGCTACTCGA CACGCTACAA AATGTTATCG GCGCGCCCTC GCTGATGCCC
GATGCACTCA CCCCCCATGA AGAGGCGGTA TTATCAAATA TCAGCTTTAT GGAAGCGGTT
CATGCCCGCT CTTACAGTTC AATTTTCTCG ACGCTGTGCC AGACCAAAGA TGTCGATGCC
GCCTACGCCT GGAGTGAAGA AAACGCGCCG TTGCAGCGAA AAGCACAGAT TATTCAGCAA
CATTATCGCG GTGATGATCC GCTGAAAAAG AAAATCGCCA GTGTGTTTCT TGAATCTTTT
TTGTTCTATT CCGGTTTCTG GCTGCCGATG TATTTTTCCA GCCGCGGAAA GCTAACCAAT
ACCGCAGACC TGATCCGTCT GATTATCCGG GATGAAGCAG TCCACGGTTA CTACATCGGC
TATAAATATC AGAAAAAACT GGAAAAAATC TCCCTGGCAC AACGTGAAGA GTTGAAGAGT
TTCGCCTTCG ATTTGTTGCT GGAACTCTAT GACAACGAGT TGCAATATAC CGATGAGCTG
TACGCCGAAA CCCCGTGGTC TGACGATGTA AAAGCGTTTC TCTGTTACAA CGCCAATAAA
GCGTTGATGA ATCTGGGCTA CGAACCGCTA TTTCCCGCAG AAATGGCGGA AGTGAATCCG
GCAATCCTCG CCGCGCTTTC GCCGAATGCC GATGAAAATC ACGATTTCTT TTCCGGTTCA
GGCTCTTCAT ATGTGATGGG AAAAGCGGTC GAAACAGAAG ATGAAGACTG GAATTTCTGA
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| Protein sequence | MKLSRISAIN WNKISDDKDL EVWNRLTSNF WLPEKVPLSN DIPAWQTLSV VEQQLTMRVF
TGLTLLDTLQ NVIGAPSLMP DALTPHEEAV LSNISFMEAV HARSYSSIFS TLCQTKDVDA
AYAWSEENAP LQRKAQIIQQ HYRGDDPLKK KIASVFLESF LFYSGFWLPM YFSSRGKLTN
TADLIRLIIR DEAVHGYYIG YKYQKKLEKI SLAQREELKS FAFDLLLELY DNELQYTDEL
YAETPWSDDV KAFLCYNANK ALMNLGYEPL FPAEMAEVNP AILAALSPNA DENHDFFSGS
GSSYVMGKAV ETEDEDWNF
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