Gene EcSMS35_2785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2785 
Symbol 
ID6147483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2869952 
End bp2870401 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content49% 
IMG OID641617654 
ProductLysM domain/BON superfamily protein 
Protein accessionYP_001744814 
Protein GI170681151 
COG category[S] Function unknown 
COG ID[COG1652] Uncharacterized protein containing LysM domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.267708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCTGT TCAATTTTGT GAAAGATGCC GGAGAAAAAC TCTGGGACGC GGTTACAGGT 
CAGCACGATA AAGACGATCA GGCGAAGAAG GTGCAGGAGC ATCTGAACAA AACCGGTATA
CCTGATGCCG ATAAAGTGAA CATTCAAATC GCCGACGGCA AAGCGACGGT CACGGGTGAT
GGCCTGAGTC AGGAGGCGAA GGAGAAAATC CTTGTTGCGG TGGGGAATAT TTCCGGTATT
GCCAGTGTCG ATGATCAGGT GAAAACGGCG ACACCAGCCG CTGCCAGCCA GTTTTATACC
GTTAAGTCTG GCGACACTCT GAGTGCCATT TCCAAACAGG TCTACGGTAA CGCCAATCTG
TACAATAAAA TCTTCGAAGC GAATAAACCG ATGCTAAAAA GCCCGGATAA AATTTACCCG
GGGCAAGTGT TGCGTATTCC TGAAGAGTAG
 
Protein sequence
MGLFNFVKDA GEKLWDAVTG QHDKDDQAKK VQEHLNKTGI PDADKVNIQI ADGKATVTGD 
GLSQEAKEKI LVAVGNISGI ASVDDQVKTA TPAAASQFYT VKSGDTLSAI SKQVYGNANL
YNKIFEANKP MLKSPDKIYP GQVLRIPEE