| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2782 |
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| Symbol | gabT2 |
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| ID | 6143779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2866351 |
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| End bp | 2867631 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641617651 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_001744811 |
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| Protein GI | 170683877 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.480055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCA ATAAAGAGTT AATGCAGCGC CGCAGTCAGG CGATTCCCCG TGGCGTTGGG
CAAATTCACC CGATTTTCGC TGACCGCGCG GAAAACTGCC GGGTGTGGGA CGTTGAAGGC
CGTGAGTATC TTGATTTCGC GGGCGGGATT GCGGTGCTCA ATACCGGGCA CCTGCATCCG
AAGGTGGTGG CCGCGGTGGA AGCGCAGTTG AAAAAACTGT CGCACACCTG CTTCCAGGTG
CTGGCTTACG AGCCGTATCT GGAGCTGTGC GAGATTATGA ATCAGAAGGT GCCGGGCGAT
TTCGCCAAGA AAACGCTGCT GGTTACGACC GGTTCCGAAG CGGTGGAAAA CGCGGTGAAA
ATCGCCCGCG CCGCCACCAA ACGTAGCGGC ACCATCGCTT TTAGCGGCGC GTATCACGGG
CGCACGCATT ACACGCTGGC GCTGACCGGC AAGGTGAATC CGTACTCTGC GGGCATGGGG
CTGATGCCGG GTCATGTTTA TCGCGCGCTT TATCCTTGCC CGCTGCACGG CATAAGCGAG
GATGACGCTA TCGCCAGCAT CCACCGGATC TTCAAAAATG ATGCCGCGCC GGAAGATATC
GCCGCCATCG TGATTGAGCC CGTTCAGGGC GAAGGCGGTT TCTACGCCGC GACGCCAGCC
TTTATGCAGC GTTTACGCGC GCTGTGTGAC GAGCACGGGA TCATGCTGAT TGCCGATGAA
GTGCAGAGCG GCGCAGGGCG TACCGGCACG CTGTTTGCGA TGGAGCAAAT GGGCGTGGCA
CCAGATCTCA CCACCTTTGC GAAATCGATC GCAGGCGGTT TCCCGCTGGC GGGCGTCACC
GGGCGCGCGG AAGTGATGGA CGCCGTCGCA CCGGGCGGAC TGGGTGGCAC CTATGCCGGT
AACCCGATTG CCTGCGTAGC GGCGCTGGAA GTGTTGAAGG TGTTCGAGCA GGAAAATCTG
CTGCAAAAAG CCAACGTTCT GGGGCAGAAG CTGAAAGACG GATTGCTGGC GATCGCCGAA
AAACACCCGG AGATCGGCGA CGTACGCGGG CTGGGGGCGA TGATCGCCAT CGAGCTGTTT
GAAGATGGCG ATCCCAGCAA ACCGGACGCA AAACTCACCG CCGAGATCGT GGCACGCGCC
CGCGATAAGG GTCTGATTCT TCTCTCCTGC GGCCCGTATT ACAACGTGCT GCGCATCCTT
GTACCGCTCA CCATTGAAGA CGCTCAGATC CGTCAGGGTC TGGAGATCAT CAGCCAGTGT
TTTGCTGAGG CGAAGCTGTA G
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| Protein sequence | MSSNKELMQR RSQAIPRGVG QIHPIFADRA ENCRVWDVEG REYLDFAGGI AVLNTGHLHP
KVVAAVEAQL KKLSHTCFQV LAYEPYLELC EIMNQKVPGD FAKKTLLVTT GSEAVENAVK
IARAATKRSG TIAFSGAYHG RTHYTLALTG KVNPYSAGMG LMPGHVYRAL YPCPLHGISE
DDAIASIHRI FKNDAAPEDI AAIVIEPVQG EGGFYAATPA FMQRLRALCD EHGIMLIADE
VQSGAGRTGT LFAMEQMGVA PDLTTFAKSI AGGFPLAGVT GRAEVMDAVA PGGLGGTYAG
NPIACVAALE VLKVFEQENL LQKANVLGQK LKDGLLAIAE KHPEIGDVRG LGAMIAIELF
EDGDPSKPDA KLTAEIVARA RDKGLILLSC GPYYNVLRIL VPLTIEDAQI RQGLEIISQC
FAEAKL
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