| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2768 |
|---|
| Symbol | recN |
|---|
| ID | 6144042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 2847359 |
|---|
| End bp | 2849020 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641617638 |
|---|
| Product | recombination and repair protein |
|---|
| Protein accession | YP_001744799 |
|---|
| Protein GI | 170683348 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0497] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00054696 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.107417 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGCAC AACTGACCAT CAGCAACTTT GCTATCGTTC GTGAGCTTGA GATTGATTTT
CATAGCGGCA TGACCGTAAT AACTGGCGAG ACCGGCGCGG GTAAATCTAT TGCAATAGAT
GCCCTCGGTC TTTGTCTCGG TGGTCGCGCT GAAGCCGACA TGGTGCGTAC CGGCGCTGCT
CGCGCTGACC TGTGCGCCCG TTTTTCTCTG AAAGATACGC CAGCGGCCCT GCGCTGGCTG
GAAGAAAACC AGCTTGAAGA CGGGCATGAA TGTTTGCTTC GTCGCGTAAT CAGCAGCGAT
GGTCGCTCCC GTGGTTTTAT CAACGGTACA GCGGTTCCTC TTTCACAACT GCGCGAACTG
GGTCAGTTGC TGATTCAGAT CCATGGTCAG CACGCTCATC AGTTACTCAC CAAACCCGAG
CACCAAAAAT TCCTGCTTGA TGGCTATGCC AATGAAACCT CTCTACTCCA GGAAATGACC
GCACGTTATC AGTTGTGGCA TCAAAGCTGC CGTGACCTCG CGCATCATCA ACAGTTAAGT
CAGGAACGCG CCGCCCGTGC AGAACTGCTG CAATACCAAT TAAAAGAACT TAACGAATTT
AATCCGCAGC CCGGAGAGTT TGAGCAAATC GACGAAGAGT ACAAACGTCT GGCGAACAGC
GGTCAATTGC TGACCACCAG CCAGAATGCA TTGGCATTAA TGGCCGACGG TGAAGACGCA
AACCTGCAAA GTCAGCTTTA CACGGCTAAA CAACTGGTGA GCGAATTGAT TGGCATGGAC
AGCAAACTGT CCGGCGTACT TGATATGCTG GAAGAAGCTA CCATCCAGAT TGCTGAAGCC
AGCGATGAAC TGCGCCACTA CTGCGATCGT CTGGACCTCG ATCCTAACCG ACTGTTTGAA
CTTGAACAGC GCATCTCAAA ACAGATTTCG CTGGCACGTA AACATCACGT CAGCCCTGAG
GCATTGCCAC AGTATTACCA GTCGCTACTG GAAGAACAGC AGCAACTGGA CGATCAGGCC
GACTCACAAG AAACGCTCGC GCTGGCGGTA ACGAAACATC ATCAGCAGGC ACTGGAAACC
GCGAACGCAT TACACCAGCA ACGCCAGCAC TATGCAGAAG AACTTGCACA GCTGATCACC
GACAGTATGC ATGCACTCTC TATGCCGCAT GGGCAGTTTA CGATTGATGT TAAATTTGAC
GAGCATCACC TGGGCGCTGA CGGCGCTGAT CGTATTGAAT TTCGGGTAAC CACCAACCCA
GGTCAGCCAA TGCAGCCTAT TGCCAAAGTC GCATCCGGTG GTGAATTGTC ACGCATCGCA
TTGGCAATTC AGGTCATCAC GGCGCGTAAA ATGGAAACCC CGGCACTGAT TTTTGATGAA
GTGGATGTAG GGATTAGCGG CCCAACAGCG GCAGTTGTTG GCAAACTGCT GCGTCAACTC
GGCGAATCAA CTCAGGTGAT GTGTGTTACC CACCTGCCAC AAGTCGCGGG ATGTGGTCAT
CAACACTATT TTGTCAGCAA AGAAACCGAT GGTGCGATGA CAGAAACGCA TATGGAGTCG
CTGGACAAAA AAGCGCGGTT ACAAGAGCTG GCGCGCCTGC TTGGTGGCAG TGAAGTCACA
CGTAACACAC TGGCGAATGC GAAAGAACTG CTTGCGGCGT AA
|
|---|
| Protein sequence | MLAQLTISNF AIVRELEIDF HSGMTVITGE TGAGKSIAID ALGLCLGGRA EADMVRTGAA
RADLCARFSL KDTPAALRWL EENQLEDGHE CLLRRVISSD GRSRGFINGT AVPLSQLREL
GQLLIQIHGQ HAHQLLTKPE HQKFLLDGYA NETSLLQEMT ARYQLWHQSC RDLAHHQQLS
QERAARAELL QYQLKELNEF NPQPGEFEQI DEEYKRLANS GQLLTTSQNA LALMADGEDA
NLQSQLYTAK QLVSELIGMD SKLSGVLDML EEATIQIAEA SDELRHYCDR LDLDPNRLFE
LEQRISKQIS LARKHHVSPE ALPQYYQSLL EEQQQLDDQA DSQETLALAV TKHHQQALET
ANALHQQRQH YAEELAQLIT DSMHALSMPH GQFTIDVKFD EHHLGADGAD RIEFRVTTNP
GQPMQPIAKV ASGGELSRIA LAIQVITARK METPALIFDE VDVGISGPTA AVVGKLLRQL
GESTQVMCVT HLPQVAGCGH QHYFVSKETD GAMTETHMES LDKKARLQEL ARLLGGSEVT
RNTLANAKEL LAA
|
|---|
| |