Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2721 |
Symbol | lepB |
ID | 6145076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2799557 |
End bp | 2800531 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641617592 |
Product | signal peptidase I |
Protein accession | YP_001744757 |
Protein GI | 170680067 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0681] Signal peptidase I |
TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.010044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAATA TGTTTGCCCT GATTCTGGTG ATTGCCACAC TAGTGACGGG CATTTTATGG TGCGTGGATA AATTCTTTTT CGCACCTAAA CGGCGGGAAC GTCAGGCAGC GGCGCAGGCG GCTGCCGGTG ACTCACTGGA TAAAGCAACG TTGAAAAAGG TTGCGCCGAA GCCTGGCTGG CTGGAAACCG GTGCTTCTGT TTTTCCGGTG CTGGCTATCG TATTGATTGT GCGTTCGTTT ATTTATGAAC CGTTCCAGAT CCCGTCAGGT TCGATGATGC CGACTCTGTT AATCGGTGAT TTTATTCTGG TAGAGAAGTT TGCTTATGGC ATTAAAGATC CTATCTACCA GAAAACGCTG ATCGAAACCG GTCATCCGAA ACGCGGCGAT ATCGTGGTCT TTAAATATCC GGAAGATCCA AAGCTTGATT ACATCAAGCG CGCGGTGGGT TTACCGGGCG ATAAAGTCAC TTATGATCCG GTCTCGAAAG AGCTGACGAT TCAACCGGGA TGCAGTTCCG GCCAGGCATG TGAAAACGCG CTGCCGGTCA CCTACTCCAA CGTGGAACCG AGCGATTTCG TTCAGACCTT CTCACGCCGT AATGGTGGGG AAGCGACCAG CGGATTCTTT GAAGTGCCGA AAAACGAAAC CAAAGAAAAT GGAATTCGTC TTTCCGAGCG TAAAGAGACA CTGGGTGATG TGACGCACCG CATTCTGACA GTGCCGATTG CGCAGGACCA GGTGGGGATG TATTACCAGC AGCCAGGGCA ACAACTGGCA ACCTGGATTG TTCCGCCGGG ACAATACTTC ATGATGGGTG ACAACCGCGA CAACAGCGCG GACAGCCGTT ACTGGGGCTT TGTGCCGGAA GCGAATCTGG TCGGTCGGGC AACGGCTATC TGGATGAGTT TCGATAAGCA AGAAGGCGAA TGGCCGACAG GTGTGCGCTT AAGTCGCATT GGCGGCATCC ATTAA
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Protein sequence | MANMFALILV IATLVTGILW CVDKFFFAPK RRERQAAAQA AAGDSLDKAT LKKVAPKPGW LETGASVFPV LAIVLIVRSF IYEPFQIPSG SMMPTLLIGD FILVEKFAYG IKDPIYQKTL IETGHPKRGD IVVFKYPEDP KLDYIKRAVG LPGDKVTYDP VSKELTIQPG CSSGQACENA LPVTYSNVEP SDFVQTFSRR NGGEATSGFF EVPKNETKEN GIRLSERKET LGDVTHRILT VPIAQDQVGM YYQQPGQQLA TWIVPPGQYF MMGDNRDNSA DSRYWGFVPE ANLVGRATAI WMSFDKQEGE WPTGVRLSRI GGIH
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