Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2591 |
Symbol | hemF |
ID | 6142944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 2644363 |
End bp | 2645262 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641617462 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_001744627 |
Protein GI | 170679650 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0408] Coproporphyrinogen III oxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCCG ACGCACACCA GGTTAAACAG TTTCTGCTCA ACCTTCAGGA TACGATTTGT CAGCAGTTGA GCGCCGTCGA TGGCGCAGAA TTTGTCGAAG ATAGCTGGCT GCGCGAAGCT GGCGGCGGCG GGCGTAGTCG GGTTTTGCGT AATGGTGGTG TTTTCGAACA GGCAGGCGTC AACTTTTCAC ATGTCCACGG TGAGGTGATG CCTGCTTCCG CCACCGCTCA TCGTCCGGAA CTTGCCGGGC GCAGTTTCGA GGCGATGGGC GTTTCACTGG TAGTGCATCC GCATAATCCG TATGTTCCCA CCAGCCACGC GAATGTGCGC TTTTTTATTG CCGAAAAACC GGGTGCAGAG CCCGTCTGGT GGTTTGGTGG CGGCTTCGAT TTAACCCCTT TCTATGGTTT TGAAGAAGAC GCCATTCACT GGCACCGCAC CGCCCGTGAC CTGTGCCAGC CATTTGGTGA AGACGTTTAT CCGCGTTACA AAAAGTGGTG CGACGAATAC TTCTACCTCA AACATCGTAA CGAACAACGC GGCATTGGCG GCCTGTTCTT TGATGACCTG AACACGCCAG ACTTCGACCA CTGTTTTGCC TTTATGCAGG CGGTAGGCAA AGGCTACACC AACGCTTATT TACCAATTGT AGAGCGACGT AAAACGATGG CCTACGGCGA GCGCGAGCGC AATTTCCAGT TATATCGTCG CGGTCGTTAT GTCGAGTTCA ATCTGGTCTG GGATCGTGGC ACACTGTTTG GCCTGCAAAC CGGCGGGCGC ACCGAGTCTA TCCTGATGTC AATGCCGCCA CTGGTACGCT GGGAGTATGA TTATCAGCCA AAAGATGGCA GCCCGGAAGC GGCGTTAAAT GAGTTTATTA AGGTCAGGGA TTGGGTGTAA
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Protein sequence | MKPDAHQVKQ FLLNLQDTIC QQLSAVDGAE FVEDSWLREA GGGGRSRVLR NGGVFEQAGV NFSHVHGEVM PASATAHRPE LAGRSFEAMG VSLVVHPHNP YVPTSHANVR FFIAEKPGAE PVWWFGGGFD LTPFYGFEED AIHWHRTARD LCQPFGEDVY PRYKKWCDEY FYLKHRNEQR GIGGLFFDDL NTPDFDHCFA FMQAVGKGYT NAYLPIVERR KTMAYGERER NFQLYRRGRY VEFNLVWDRG TLFGLQTGGR TESILMSMPP LVRWEYDYQP KDGSPEAALN EFIKVRDWV
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