Gene EcSMS35_2590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2590 
SymbolamiA 
ID6147362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2643490 
End bp2644359 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content51% 
IMG OID641617461 
ProductN-acetylmuramoyl-l-alanine amidase I 
Protein accessionYP_001744626 
Protein GI170683652 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTT TTAAACCACT AAAAACACTC ACTTCGCGCC GCCAGGTGCT GAAAGCCGGA 
TTGGCTGCCC TGACGTTGTC AGGAATGTCG CAAGCCATCG CCAAAGAAGA ACCTTTAAAA
ACCAGCAACG GACACAGCAA GCCGAAAGCA AAAAAAAACG GCGGCAAACG TGTCGTTGTT
CTCGATCCAG GCCACGGCGG GATTGATACC GGAGCGATCG GACGCAACGG TTCGAAAGAA
AAACATGTGG TGCTGGCGAT TGCTAAAAAC GTCCGTTCCA TTTTGCGTAA TCATGGCATT
GATGCGCGTT TAACGCGTTC TGGCGATACG TTTATCCCGC TGTACGATCG CGTTGAAATC
GCCCATAAAC ACGGCGCAGA CCTGTTTATG TCAATTCATG CCGACGGCTT TACTAACCCG
AAAGCTGCCG GTGCTTCGGT ATTTGCTCTC TCTAACCGCG GCGCAAGTAG CGCAATGGCG
AAATACCTGT CTGAACGCGA AAACCGCGCC GATGAAGTTG CCGGTAAAAA GGCGACTGAC
AAGGATCACC TATTGCAGCA AGTGCTGTTT GATCTGGTGC AAACCGATAC TATTAAAAAC
AGCCTGACGC TCGGCTCGCA TATTCTGAAA AAGATTAAGC CGGTGCATAA ACTGCACAGC
CGCAACACCG AACAAGCCGC GTTTGTGGTG TTGAAATCGC CGTCGGTTCC GTCGGTGCTG
GTGGAAACCT CGTTTATCAC CAACCCGGAA GAAGAGCGGC TGTTAGGCAC TGCAGCGTTT
CGCCAGAAAA TCGCCACAGC GATTGCCGAA GGCGTGATCA GTTATTTCCA CTGGTTTGAC
AACCAGAAAG CACACTCGAG AAAGCGGTAA
 
Protein sequence
MSTFKPLKTL TSRRQVLKAG LAALTLSGMS QAIAKEEPLK TSNGHSKPKA KKNGGKRVVV 
LDPGHGGIDT GAIGRNGSKE KHVVLAIAKN VRSILRNHGI DARLTRSGDT FIPLYDRVEI
AHKHGADLFM SIHADGFTNP KAAGASVFAL SNRGASSAMA KYLSERENRA DEVAGKKATD
KDHLLQQVLF DLVQTDTIKN SLTLGSHILK KIKPVHKLHS RNTEQAAFVV LKSPSVPSVL
VETSFITNPE EERLLGTAAF RQKIATAIAE GVISYFHWFD NQKAHSRKR