Gene EcSMS35_2572 details

Gene Information

• Locus tag: EcSMS35_2572
• Symbol: crr
• ID: 6145194
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli SMS-3-5
• Kingdom: Bacteria
• Replicon accession: NC_010498
• Strand: +
• Start bp: 2626824
• End bp: 2627333
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641617443
• Product: PTS system glucose-specific transporter subunit
• Protein accession: YP_001744608
• Protein GI: 170681855
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2190] Phosphotransferase system IIA components
• TIGRFAM ID: [TIGR00830] PTS system, glucose subfamily, IIA component

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0826912
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 52
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGTTTGT TCGATAAACT GAAATCTCTG GTTTCCGACG ACAAGAAGGA TACCGGAACT 
ATTGAGATCA TTGCTCCGCT CTCTGGCGAG ATCGTCAATA TCGAAGACGT GCCGGATGTC 
GTTTTTGCGG AAAAAATCGT TGGTGATGGC ATTGCTATCA AACCAACGGG TAACAAAATG 
GTCGCGCCTG TAGACGGCAC CATTGGTAAA ATCTTTGAAA CCAACCACGC GTTCTCTATC 
GAATCTGATA GCGGCGTTGA ACTGTTCGTC CACTTCGGTA TCGACACCGT TGAACTGAAA 
GGCGAAGGCT TCAAGCGTAT TGCTGAAGAA GGTCAGCGCG TGAAAGTTGG CGATACCGTG 
ATTGAATTCG ATCTGCCGCT GCTGGAAGAG AAAGCCAAGT CTACCCTGAC TCCGGTTGTT 
ATCTCCAACA TGGACGAAAT CAAAGAACTG ATCAAACTGT CCGGTAGCGT GACTGTGGGT 
GAAACCCCGG TTATCCGCAT CAAGAAGTAA 

 

Protein sequence

MGLFDKLKSL VSDDKKDTGT IEIIAPLSGE IVNIEDVPDV VFAEKIVGDG IAIKPTGNKM 
VAPVDGTIGK IFETNHAFSI ESDSGVELFV HFGIDTVELK GEGFKRIAEE GQRVKVGDTV 
IEFDLPLLEE KAKSTLTPVV ISNMDEIKEL IKLSGSVTVG ETPVIRIKK