| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2545 |
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| Symbol | |
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| ID | 6142810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2605027 |
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| End bp | 2607216 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641617417 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001744588 |
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| Protein GI | 170684005 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00846864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGTGG AGCATAACCT GATAAAAAAT ATCAAGATAT TCACACTAGC GTTTACGCTC
ACCGTGGTAC TTATTCAGCT ATCCCGTTTT ATTTCGCCAC TTGCCATTAT CCATTCCAGT
TATATCTTTC TGGCGTGGAT GCCACTGTGC GTAATGCTGT CAATCTTGTT TATCTTTGGC
TGGCGCGGTG TCGTTCCCGT TTTATGCGGG ATGTTTTGCA CCAATCTGTG GAACTTTCAT
CTCTCTTTTT TACAGACCGC GGTCATGCTC GGCAGCCAGA CGTTTGTTGT GTTGTGTGCC
TGCGCAATAT TACGCTGGCA GCTGGGGACG CGTTGGCGTT ATGGATTGAC CAGCCGATAT
GTCTGGCAAC GTCTGTTCTG GCTTGGTTTG GTGGCGCCGA TTGGCATCAA ATGCAGCATG
TATCTTGTGG GAAATTTCTT TGATTTTCCG CTAAAGATAT CTACCTTTTT CGGCGATGCG
GATGCCATTT TCACGGTCGT TGATTTGCTA AGCCTTTTCA CCGCAGTGCT GATTTACAAC
ATGCTTTTTT ACTATCTCAC CCGCATGATT GTAAGTCCCC ACTTTGCACA GATATTGTGG
CGTAGGGATA TCGCTCCGTC GTTGAGCAAA GAGAAACGCG CATTTACCTT AAGCTGGCTG
GCAGCTCTTA GCGTGCTGCT ACTTCTGATG TGCACACCGT ATGAAAATGA CTTTATTGCC
GGTTACCTGG TACCTGTTTT CTTTATCATC TTTACCCTCG GTGTCGGTAA GCTTCGCTAT
CCGTTTTTAA ATCTCACCTG GGCTGTTTCA ACGCTTTGCC TTCTGAATTA CAACCAGAAC
TTTTTGCAAG GGGTACTAAC CGAATATTCG CTGGCATTTA TTCTCGCAGT ACTGATTTCC
TTTAGTGTTT GCCTGCTCTA TATGGTGCGT ATTTATCATC GTAGTGAATG GCTTAACCGC
CGCTGGCATT TGCAGGCGCT GACCGATCCG TTAACGCTTC TACCCAACTT TCGTGCGTTG
GAGCAAGCGC CGGAGCAAGA GGCGGGCAAG AGTTTTTGCT GCCTGCGCAT TGATAATCTT
GAGTTTATGA GTCGTCATTA CGGCTTAATG ATGCGCGTTC ACTGTATCCG CTCAATTTAC
CGTACGCTGC TGCCGTTGAT GCAGGAAAAC GAAAAGTTGT ATCAATTGCC GGGTAGTGAA
CTGCTGATAG TGCTGAGCGG GCCGGAAACG GAAGGGCGAC TCCAGCATAT GGTTAACATC
CTGAATAGTC GGCAAATTCA CTGGAACAAT ACCGGGCTGG ATATGGGCTA TGGTGCTGCC
TGGGGGCGTT TTGATGGAAA TCAGGAAACC CTGCAACCCT TGTTGGGGCA GTTAAGCTGG
CTGGCGGAAC AATCCTGCGC TCATCATCAT GTGCTGGCGC TGGATAGCAG AGAGGAGATG
GTTTCCGGGC AGACCACTAA ACAGGTGCTA TTGCTGAATA CCATTCGTAC TGCATTAGAT
CAGGGCGATT TGCTGCTCTA CGCCCAGCCA ATTCGCAACA AAGAGGGTGA AGGTTATGAT
GAGATCCTCG CGCGACTGAA ATATGACGGC GGCATTATGA CCCCGGATAA GTTTCTGCCC
CTTATTGCTC AGTTTAACCT TAGCGCGCGT TTTGATTTGC AAGTGCTGGA ATCCTTGTTG
AAGTGGCTGG CAACACACCC TTGCGACAAA AAAGGTCCGC GCTTTTCAGT CAATTTAATG
CCGCTCACGC TGCTGCAAAA AAATATCGCC GGGCGGATTA TTCGTCTGTT TAAGCGTTAT
CACATCTCCC CGCAGGCGGT CATTCTTGAG ATCACCGAGG AGCAGGCGTT TTCTAACGCA
GAAAGCAGCA TGTACAACAT CGAGCAACTG CATAAGTTTG GTTTCCGGAT TGCGATTGAT
GACTTTGGCA CCGGCTATGC CAACTACGAA CGGTTAAAGC GTTTGCAGGC TGATATCATC
AAAATTGATG GTGTCTTTGT GAAAGATATC GTCACGAATA CGCTGGATGC GATGATTGTG
AGATCAATTA CCGATCTGGC GAAAGCGAAG TCATTGAGTG TGGTCGCGGA GTTTGTCGAG
ACGCAACAGC AGCAGGCGCT ATTGCATAAG CTCGGGGTGC AATATCTGCA AGGGTATTTG
ATTGGTCGCC CGCAGCCATT AGCTGATTAA
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| Protein sequence | MFVEHNLIKN IKIFTLAFTL TVVLIQLSRF ISPLAIIHSS YIFLAWMPLC VMLSILFIFG
WRGVVPVLCG MFCTNLWNFH LSFLQTAVML GSQTFVVLCA CAILRWQLGT RWRYGLTSRY
VWQRLFWLGL VAPIGIKCSM YLVGNFFDFP LKISTFFGDA DAIFTVVDLL SLFTAVLIYN
MLFYYLTRMI VSPHFAQILW RRDIAPSLSK EKRAFTLSWL AALSVLLLLM CTPYENDFIA
GYLVPVFFII FTLGVGKLRY PFLNLTWAVS TLCLLNYNQN FLQGVLTEYS LAFILAVLIS
FSVCLLYMVR IYHRSEWLNR RWHLQALTDP LTLLPNFRAL EQAPEQEAGK SFCCLRIDNL
EFMSRHYGLM MRVHCIRSIY RTLLPLMQEN EKLYQLPGSE LLIVLSGPET EGRLQHMVNI
LNSRQIHWNN TGLDMGYGAA WGRFDGNQET LQPLLGQLSW LAEQSCAHHH VLALDSREEM
VSGQTTKQVL LLNTIRTALD QGDLLLYAQP IRNKEGEGYD EILARLKYDG GIMTPDKFLP
LIAQFNLSAR FDLQVLESLL KWLATHPCDK KGPRFSVNLM PLTLLQKNIA GRIIRLFKRY
HISPQAVILE ITEEQAFSNA ESSMYNIEQL HKFGFRIAID DFGTGYANYE RLKRLQADII
KIDGVFVKDI VTNTLDAMIV RSITDLAKAK SLSVVAEFVE TQQQQALLHK LGVQYLQGYL
IGRPQPLAD
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