| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2500 |
|---|
| Symbol | fadJ |
|---|
| ID | 6146373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 2545713 |
|---|
| End bp | 2547857 |
|---|
| Gene Length | 2145 bp |
|---|
| Protein Length | 714 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641617372 |
|---|
| Product | multifunctional fatty acid oxidation complex subunit alpha |
|---|
| Protein accession | YP_001744544 |
|---|
| Protein GI | 170682519 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | [TIGR02440] fatty oxidation complex, alpha subunit FadJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.273227 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATGG CATCAGCGTT TACTCTTAAT GTTCGTCTGG ACAACATTGC TATCATCACC
ATCGACGTAC CGGGTGAGAA AATGAATACC CTGAAGGCGG AATTTGCCTC GCAGGTACGC
GCCATTATTA AGCAACTCCG TGAAAACAAA GAGTTGCGTG GCGTGGTGTT TGTCTCCGCG
AAACCAGACA ACTTCATTGC TGGCGCAGAC ATCAACATGA TCGGCAACTG CAAAACGGCG
CAAGAAGCGG AAGTACTGGC GCGGCAGGGG CAACAGTTAA TGGCGGAGAT TCATGCTTTG
CCCGTTCCGG TTATCGCGGC TATTCATGGC GCTTGCCTGG GCGGTGGTCT GGAGTTGGCG
CTGGCGTGCC ACGGTCGCGT GTGTACTGAT GATGCTAAAA CGGTGCTCGG TTTGCCTGAA
GTACAACTTG GATTATTACC CGGTTCAGGC GGCACCCAGC GTTTACCGCG CCTGATAGGT
GTCAGCACAG CATTGGAGAT GATCCTCACT GGAAAACAAC TTCGGGCGAA ACAGGCATTA
AAGCTGGGGC TGGTGGATGA CGTCGTTCCG CAATCCATTT TACTGGAAGC CGCTGTTGAG
CTGGCAAAGC AGGATCGTCC ATCTTCACGC CCTCTACCTG TACGCGAGCG TATTCTGGCG
GGGCCGTTAG GTCGTGCGCT GCTGTTCAAA ATGGTCGGCA AGAAAACAGA ACACAAAACT
CAGGGTAACT ATCCGGCGAC AGAACGCATC CTGGAGGTTG TCGAAACGGG ATTAGCGCAG
GGCACCAGTA GCGGCTATGA CGCTGAAGCA CGGGCGTTTG GCGAACTGGC GATGACGCCG
CAATCGCAGG CGCTGCGCAA TATCTTTTTT GCCAGTACGG AAGTGAAGAA AGATTCCGGC
AGTGATGCGC CGCCTGCGCC ATTAAACAGC GTGGGGATTC TCGGTGGTGG CTTGATGGGC
GGCGGTATTG CTTATGTCAC TGCTTGTAAA GCGGGGCTTT CGGTCAGAAT TAAAGATATC
AACCCGCAGG GCATAAATCA TGCGCTGAAG TACAGTTGGG ATCAGCTGGA GGGCAAAGTT
CGCCGTCGTC ATCTCAAAGC CAGCGAACGT GACAAACAGC TGGCTTTAAT CTCCGGAACG
ACGGACTATT GCGGCTTTGC CCATCGCGAT CTGATTATTG AAGCGGTGTT TGAAAATCTC
GAATTAAAAC AACAGATGGT GGCGGAAGTG GAGCAAAATT GCGCTACTCA TACCATCTTT
GCTTCGAACA CGTCATCTTT ACCGATTGGC GATATCGCCG CTCACGCCGC GCGACCTGAG
CAAGTTATTG GCCTGCATTT CTTCAGTCCG GTGGAAAAAA TGCCGCTGGT GGAGATTATT
CCTCATGCGA GTACATCGGC GCAAACCATC GCCACCACGG TAAAACTGGC GAAAAAACAG
GGCAAAACGC CAATTGTCGT GCGTGACAAA GCCGGGTTTT ACGTCAATCG CATCTTAGCG
CCTTACATCA ATGAAGCTAT CCGCATGTTG ACCGAAGGCG AGCGTATTGA GCATATCGAT
GCCGCGCTGG TGAAATTTGG TTTTCCGGTA GGCCCAATCC AACTTTTGGA TGAGGTAGGA
ATCGACACCG GGACTAAAAT TATTCCTGTA CTGGAAGCCG CTTATGGAGA ACGTTTTAGC
GCGCCTGCAA ATGTTGTTTC TTCAATTTTG AACGACGATC GCAAAGGCAG AAAAAATGGT
CGGGGTTTCT ATCTTTATGG TCAGAAAGGG CGTAAAAGCA AAAAACAGGT CGATCCCGCC
ATTTACCCGC TCATTGGCGC ACAAGGGCAG GGGCGACTCT CCGCACCGCA GGTTGCTGAA
CGGTGTGTGA TGTTGATGCT GAATGAAGCA GTACGTTGTC TGGACGAGCA GGTTATCCGT
AGCGTACGTG ACGGGGATAT TGGCGCGGTA TTTGGCATTG GTTTTCCGCC ATTTCTCGGT
GGACCGTTCC GCTATATCGA TTCTCTCGGC GCAGGCGAAG TGGTTGCAAT AATGCAACGA
CTGGCCACGC AGTATGGTTC CCGTTTTACC CCTTGCGAGC GTTTAGTCGA GATGAGCAAG
CGTGGGGAAA GTTTTTGGAA AACAACTGCA ACTGACCTGC AATAA
|
|---|
| Protein sequence | MEMASAFTLN VRLDNIAIIT IDVPGEKMNT LKAEFASQVR AIIKQLRENK ELRGVVFVSA
KPDNFIAGAD INMIGNCKTA QEAEVLARQG QQLMAEIHAL PVPVIAAIHG ACLGGGLELA
LACHGRVCTD DAKTVLGLPE VQLGLLPGSG GTQRLPRLIG VSTALEMILT GKQLRAKQAL
KLGLVDDVVP QSILLEAAVE LAKQDRPSSR PLPVRERILA GPLGRALLFK MVGKKTEHKT
QGNYPATERI LEVVETGLAQ GTSSGYDAEA RAFGELAMTP QSQALRNIFF ASTEVKKDSG
SDAPPAPLNS VGILGGGLMG GGIAYVTACK AGLSVRIKDI NPQGINHALK YSWDQLEGKV
RRRHLKASER DKQLALISGT TDYCGFAHRD LIIEAVFENL ELKQQMVAEV EQNCATHTIF
ASNTSSLPIG DIAAHAARPE QVIGLHFFSP VEKMPLVEII PHASTSAQTI ATTVKLAKKQ
GKTPIVVRDK AGFYVNRILA PYINEAIRML TEGERIEHID AALVKFGFPV GPIQLLDEVG
IDTGTKIIPV LEAAYGERFS APANVVSSIL NDDRKGRKNG RGFYLYGQKG RKSKKQVDPA
IYPLIGAQGQ GRLSAPQVAE RCVMLMLNEA VRCLDEQVIR SVRDGDIGAV FGIGFPPFLG
GPFRYIDSLG AGEVVAIMQR LATQYGSRFT PCERLVEMSK RGESFWKTTA TDLQ
|
|---|
| |