Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2485 |
Symbol | mepA |
ID | 6146071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2532327 |
End bp | 2533151 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641617357 |
Product | penicillin-insensitive murein endopeptidase |
Protein accession | YP_001744529 |
Protein GI | 170680002 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3770] Murein endopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.765276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAA CCGCGATTGC GCTGCTGGCC CTGCTTGCCA GTAGCGCCAG CCTGGCAGCG ACGCCGTGGC AAAAAATAAC CCAACCTGTG CCGGGTAGCG CACAATCGAT AGGCAGTTTT TCCAATGGTT GTATCGTCGG CGCTGACACG CTGCCGATAC AGTCCGAGCA TTATCAGGTC ATGCGTACCG ATCAGCGTCG CTATTTCGGG CACCCGGATC TGGTGATGTT TATCCAGCGT CTGAGTCGCC AGGTGAGCAA TCTGGGCATG GGTACGGTGC TGATTGGCGA TATGGGGATG CCCGCTGGTG GTCGTTTCAA CGGCGGTCAC GCCAGCCACC AGACCGGACT GGATGTCGAT ATCTTCCTGC AACTGCCGAA AACACGCTGG ACCTCCGCGC AGCTCTTGCG CCCGCAAGCT CTGGACTTAG TTTCCCGCGA CGGTAAACAC GTTGTCCCCG CGCTGTGGAA GCCAGAAATT TTCAGCTTGA TCAAACTCGC CGCCCAGGAC AAAGACGTCA CGCGCATTTT TGTTAATCCG GCGATTAAAC AACAACTTTG CCTTGATGCG GGCACCGATC GCGACTGGTT ACGTAAAGTG CGACCCTGGT TCCAGCATCG CGCGCATATG CATGTACGAT TACGTTGTCC TGCCGATAGT CTGGAGTGTG AAGATCAACC TTTACCGCCA CCAGGCGATG GTTGCGGGGC AGAACTGCAA AGCTGGTTTG AACCACCAAA ACCGGGAACA ACAAAGCCTG AGAAGAAGAC ACCGCCTCCG TTGCCGCCTT CCTGCCAGGC GCTACTGGAT GAGCACGTGA TCTAA
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Protein sequence | MNKTAIALLA LLASSASLAA TPWQKITQPV PGSAQSIGSF SNGCIVGADT LPIQSEHYQV MRTDQRRYFG HPDLVMFIQR LSRQVSNLGM GTVLIGDMGM PAGGRFNGGH ASHQTGLDVD IFLQLPKTRW TSAQLLRPQA LDLVSRDGKH VVPALWKPEI FSLIKLAAQD KDVTRIFVNP AIKQQLCLDA GTDRDWLRKV RPWFQHRAHM HVRLRCPADS LECEDQPLPP PGDGCGAELQ SWFEPPKPGT TKPEKKTPPP LPPSCQALLD EHVI
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