Gene EcSMS35_2485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2485 
SymbolmepA 
ID6146071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2532327 
End bp2533151 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content56% 
IMG OID641617357 
Productpenicillin-insensitive murein endopeptidase 
Protein accessionYP_001744529 
Protein GI170680002 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3770] Murein endopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.765276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAA CCGCGATTGC GCTGCTGGCC CTGCTTGCCA GTAGCGCCAG CCTGGCAGCG 
ACGCCGTGGC AAAAAATAAC CCAACCTGTG CCGGGTAGCG CACAATCGAT AGGCAGTTTT
TCCAATGGTT GTATCGTCGG CGCTGACACG CTGCCGATAC AGTCCGAGCA TTATCAGGTC
ATGCGTACCG ATCAGCGTCG CTATTTCGGG CACCCGGATC TGGTGATGTT TATCCAGCGT
CTGAGTCGCC AGGTGAGCAA TCTGGGCATG GGTACGGTGC TGATTGGCGA TATGGGGATG
CCCGCTGGTG GTCGTTTCAA CGGCGGTCAC GCCAGCCACC AGACCGGACT GGATGTCGAT
ATCTTCCTGC AACTGCCGAA AACACGCTGG ACCTCCGCGC AGCTCTTGCG CCCGCAAGCT
CTGGACTTAG TTTCCCGCGA CGGTAAACAC GTTGTCCCCG CGCTGTGGAA GCCAGAAATT
TTCAGCTTGA TCAAACTCGC CGCCCAGGAC AAAGACGTCA CGCGCATTTT TGTTAATCCG
GCGATTAAAC AACAACTTTG CCTTGATGCG GGCACCGATC GCGACTGGTT ACGTAAAGTG
CGACCCTGGT TCCAGCATCG CGCGCATATG CATGTACGAT TACGTTGTCC TGCCGATAGT
CTGGAGTGTG AAGATCAACC TTTACCGCCA CCAGGCGATG GTTGCGGGGC AGAACTGCAA
AGCTGGTTTG AACCACCAAA ACCGGGAACA ACAAAGCCTG AGAAGAAGAC ACCGCCTCCG
TTGCCGCCTT CCTGCCAGGC GCTACTGGAT GAGCACGTGA TCTAA
 
Protein sequence
MNKTAIALLA LLASSASLAA TPWQKITQPV PGSAQSIGSF SNGCIVGADT LPIQSEHYQV 
MRTDQRRYFG HPDLVMFIQR LSRQVSNLGM GTVLIGDMGM PAGGRFNGGH ASHQTGLDVD
IFLQLPKTRW TSAQLLRPQA LDLVSRDGKH VVPALWKPEI FSLIKLAAQD KDVTRIFVNP
AIKQQLCLDA GTDRDWLRKV RPWFQHRAHM HVRLRCPADS LECEDQPLPP PGDGCGAELQ
SWFEPPKPGT TKPEKKTPPP LPPSCQALLD EHVI