| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2481 |
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| Symbol | mnmC |
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| ID | 6143237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2528596 |
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| End bp | 2530602 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641617353 |
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| Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
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| Protein accession | YP_001744525 |
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| Protein GI | 170682200 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACACT ACGCCATACA ACCTGCCAAC CTTGAATTTA ATGCTGAGGG TACACCTGTT
TCCCGAGATT TTGACGATGT CTATTTTTCC AACGATAACG GACTGGAAGA GACGCGTTAT
GTTTTTCTTG GGGGTAACCA ATTAGAGGCA CGTTTTCCTG AGCATCCACA TCCTCTGTTT
GTGGTAGCAG AGAGCGGCTT CGGCACCGGA TTAAACTTCC TGACGCTATG GCAGGCATTT
GATCAGTTTC GCGAAGCGCA TCCACAGGCG CAATTACAAC GCTTACATTT CATTAGTTTT
GAAAAATTTC CCCTCGCCCG TGCGGATTTA GCCTTAGCGC ATCATCACTG GCCGGAACTG
GCTCCGTGGG CGGAACAACT TCAGGCGCAG TGGCCAATGC CCTTGCCCGG TTGCCATCGT
TTATTGTTCG ATGAAGGCCA CGTGACGCTG GATTTATGGT TTGGCGATAT AAACGAACTG
ACCAGCCAAC TGGACGATTC GCTGAATCAA AAAGTAGATG CCTGGTTTCT GGACGGCTTT
GCGCCAGCGA AAAACCCGGA TATGTGGACG CAAAATCTGT TTAAGGCCAT GGCAAGGTTA
GCGCGTCCGG GCGGCACGCT GGCGACCTTT ACGTCTGCCG GTTTTGTCCG CCGCGGTTTG
CAGGAAGCCG GATTTAGCAT GCAAAAGCGC AAAGGGTTTG GGCGCAAACG GGAAATGCTT
TGTGGGGTGA TGGAACAGAC ATTACCCCTC CCCTGCTCCA CGCCGTGGTT TAACCGTACG
GGCAGCAACA AACAGGAAGC GGCAATTATT GGAGGCGGTA TTGCCAGCGC GTTGTTGTCA
CTGGCGCTAT TGCGTCGCGG CTGGCAAGTA ACGCTTTATT GCGCGGATGA GGCTCCCGCA
CTGGGTGCTT CCGGCAATCG CCAGGGGGCG CTGTATCCGC TTTTAAGTAA ACACGATGAA
GCGCTAAACC GTTTTTTCTC TAATGCGTTT ACTTTTGCTC GTCGGTTTTA CGACCAATTA
CCCGTTAAAT TTGATCATGA CTGGTGCGGC GTCACGCAGT TAGGCTGGGA TGAGAAAAGC
CAGCATAAAA TCGCACAGAT GTTGTCGATG GATTTACCCG CAGAACTGGC TGTAGCCGTT
GAGGCAAATG CGGTTGAACA AATTACGGGC GTTGCGACAA ATTGCAGCGG TATTACTTAT
CCGGAAGGTG GCTGGCTGTG TCCGGCAGAA CTAACCCGTA ATGTGCTGGA ACTGGCACAA
CAGCAAGGTT TGCAAATTCG TTATCAACAT CAGTTACAGG ATTTATCCCG TAAGGATGAC
GGTTGGTTGT TGAATTTTGC AGGTGATCAG CAAGCAACAC ACAGTGTAGT GGTACTGGCG
AACGGGCATC AAATCAGCCG TTTCAGCCAA ACGTCGTCTC TGCCAGTGTA TTCGGTTGCC
GGTCAGGTCA GCCATATTCC GACAACGCCG GAACTGGCAA AACTGAAACA GGTGCTGTGC
TATGACGGTT ATCTCACGCC ACAAAATCCG GCGAATCAAC ATCATTGTAT TGGTGCCAGT
TATCATCGCG GCAGCGAAGA TACGGCGTAC AGTGAGGACG ATCAGCAGCA GAATCGCCAG
CGGTTGATTG ATTGTTTCCC GCAGGCACAA TGGGCGAAAG CGGTTGATGT CAGTGATAAA
GAGGCGCGTT GCGGTGTACG TTGTGCCACC CGCGATCATC TGCCAATGGT AGGCAACGTG
CCTGATTATG ACGCTACACT CGTGGAATAT GCGTCGCTGG CGGAGAAGAA AGATGAAGCG
GTAAGCGCGC CGGTTTATGA CGATCTCTTT ATGTTTGCTG CTTTAGGTTC GCGCGGTTTG
TGTTCTGCTC CGCTGTGTGC CGAGATTCTG GCGGCACAGA TGAGTGAAGA ACCGATTCCG
ATGGATGCCA GTACGCTGGC GGCGTTAAAC CCGAATCGGT TATGGGTGCG GAAGTTGTTG
AAGGGTAAAG CGGTTAAGGC GGGGTAA
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| Protein sequence | MKHYAIQPAN LEFNAEGTPV SRDFDDVYFS NDNGLEETRY VFLGGNQLEA RFPEHPHPLF
VVAESGFGTG LNFLTLWQAF DQFREAHPQA QLQRLHFISF EKFPLARADL ALAHHHWPEL
APWAEQLQAQ WPMPLPGCHR LLFDEGHVTL DLWFGDINEL TSQLDDSLNQ KVDAWFLDGF
APAKNPDMWT QNLFKAMARL ARPGGTLATF TSAGFVRRGL QEAGFSMQKR KGFGRKREML
CGVMEQTLPL PCSTPWFNRT GSNKQEAAII GGGIASALLS LALLRRGWQV TLYCADEAPA
LGASGNRQGA LYPLLSKHDE ALNRFFSNAF TFARRFYDQL PVKFDHDWCG VTQLGWDEKS
QHKIAQMLSM DLPAELAVAV EANAVEQITG VATNCSGITY PEGGWLCPAE LTRNVLELAQ
QQGLQIRYQH QLQDLSRKDD GWLLNFAGDQ QATHSVVVLA NGHQISRFSQ TSSLPVYSVA
GQVSHIPTTP ELAKLKQVLC YDGYLTPQNP ANQHHCIGAS YHRGSEDTAY SEDDQQQNRQ
RLIDCFPQAQ WAKAVDVSDK EARCGVRCAT RDHLPMVGNV PDYDATLVEY ASLAEKKDEA
VSAPVYDDLF MFAALGSRGL CSAPLCAEIL AAQMSEEPIP MDASTLAALN PNRLWVRKLL
KGKAVKAG
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