Gene EcSMS35_2480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2480 
SymbolfabB 
ID6146990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2527217 
End bp2528437 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content56% 
IMG OID641617352 
Product3-oxoacyl-(acyl carrier protein) synthase I 
Protein accessionYP_001744524 
Protein GI170683941 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTG CAGTGATTAC TGGCCTGGGC ATTGTTTCCA GCATCGGTAA TAACCAGCAG 
GAAGTCCTGG CATCTCTGCG TGAAGGACGT TCAGGGATCA CTTTCTCTCA GGAGCTGAAG
GATTCCGGCA TGCGTAGCCA CGTCTGGGGC AACGTAAAAC TGGATACCAC TGGCCTCATT
GACCGCAAAG TTGTGCGCTT TATGAGCGAC GCATCCATTT ATGCATTCCT TTCTATGGAG
CAGGCAATTG CAGATGCTGG CCTCTCCCCG GAAGCTTACC AGAATAACCC GCGCGTTGGC
CTGATTGCAG GTTCCGGCGG CGGTTCCCCG CGTTTCCAGG TTTTCGGCGC TGACGCAATG
CGCGGCCCGC GAGGCCTGAA AGCGGTTGGC CCGTATGTGG TCACCAAAGC GATGGCATCC
GGCGTTTCTG CCTGCCTCGC CACGCCGTTT AAAATTCACG GCGTTAACTA CTCCATCAGC
TCCGCGTGTG CGACTTCCGC ACACTGTATC GGTAACGCAG TAGAGCAGAT CCAACTGGGC
AAACAGGACA TCGTGTTTGC TGGCGGCGGC GAAGAGCTGT GCTGGGAAAT GGCTTGCGAA
TTCGACGCGA TGGGTGCGCT GTCTACTAAA TACAACGACA CCCCGGAAAA AGCCTCCCGT
ACTTACGACG CTCACCGTGA CGGTTTCGTT ATCGCTGGCG GTGGCGGTAT GGTAGTGGTT
GAAGAGCTGG AACACGCGCT GGCGCGTGGT GCTCACATCT ATGCTGAAAT CGTTGGCTAC
GGCGCAACCT CTGATGGCGC AGACATGGTT GCTCCGTCTG GCGAAGGTGC AGTGCGCTGC
ATGAAGATGG CGATGCACGG TGTTGATACC CCAATCGACT ACCTGAACTC TCATGGTACT
TCGACTCCGG TTGGCGACGT GAAAGAACTG GCAGCTATCC GTGAAGTGTT CGGCGATAAG
AGCCCGGCGA TTTCTGCAAC CAAAGCAATG ACCGGTCACT CACTGGGCGC TGCTGGCGTA
CAGGAAGCTA TCTACTCTCT GCTGATGCTG GAACACGGTT TTATCGCCCC GAGCATCAAC
ATTGAAGAGC TGGACGAGCA GGCTGCGGGT CTGAACATCG TGACCGAAAC GACCGATCGC
GAACTGACCA CCGTTATGTC TAACAGCTTC GGCTTCGGCG GCACTAACGC CACGCTGGTA
ATGCGCAAGC TGAAAGATTA A
 
Protein sequence
MKRAVITGLG IVSSIGNNQQ EVLASLREGR SGITFSQELK DSGMRSHVWG NVKLDTTGLI 
DRKVVRFMSD ASIYAFLSME QAIADAGLSP EAYQNNPRVG LIAGSGGGSP RFQVFGADAM
RGPRGLKAVG PYVVTKAMAS GVSACLATPF KIHGVNYSIS SACATSAHCI GNAVEQIQLG
KQDIVFAGGG EELCWEMACE FDAMGALSTK YNDTPEKASR TYDAHRDGFV IAGGGGMVVV
EELEHALARG AHIYAEIVGY GATSDGADMV APSGEGAVRC MKMAMHGVDT PIDYLNSHGT
STPVGDVKEL AAIREVFGDK SPAISATKAM TGHSLGAAGV QEAIYSLLML EHGFIAPSIN
IEELDEQAAG LNIVTETTDR ELTTVMSNSF GFGGTNATLV MRKLKD