| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2456 |
|---|
| Symbol | |
|---|
| ID | 6144706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 2506109 |
|---|
| End bp | 2506660 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641617328 |
|---|
| Product | phosphodiesterase |
|---|
| Protein accession | YP_001744500 |
|---|
| Protein GI | 170680770 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0622] Predicted phosphoesterase |
|---|
| TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000140004 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGA TGTTTGCATC GGACATTCAT GGGTCGTTAC CGGCGACGGA ACGTGTTCTG
GAGTTGTTTG CCCAAAGCGG TGCCCAGTGG CTGGTGATCC TTGGCGACGT GTTGAATCAC
GGCCCGCGTA ATGCTTTACC GGAGGGTTAC GCGCCAGCCA AAGTCGCTGA ACGGCTTAAT
GAAGTGGCAC ATAAGGTTAT CGCTGTGCGC GGCAACTGCG ACAGCGAAGT GGATCAAATG
CTGCTGCATT TCCCGATAAC CGCGCCGTGG CAACAGGTAT TACTGGAAAA ACAACGTCTG
TTTTTGACGC ATGGTCATCT TTTTGGCCCG GAAAACCTAC CTGCTTTAAA CCAGAACGAT
GTGCTGGTGT ACGGTCATAC CCATCTGCCA GTGGCAGAAC AGCGGGGGGA GATTTTCCAC
TTCAACCCCG GCTCGGTGAG TATTCCTAAA GGCGGTAATC CGGCGAGTTA TGGCATGCTG
GATAATGACG TACTTAGTGT AATCGCACTC AATGATCAAA GTATCATTGC GCAGGTCGCG
ATTAATCCGT AA
|
|---|
| Protein sequence | MKLMFASDIH GSLPATERVL ELFAQSGAQW LVILGDVLNH GPRNALPEGY APAKVAERLN
EVAHKVIAVR GNCDSEVDQM LLHFPITAPW QQVLLEKQRL FLTHGHLFGP ENLPALNQND
VLVYGHTHLP VAEQRGEIFH FNPGSVSIPK GGNPASYGML DNDVLSVIAL NDQSIIAQVA
INP
|
|---|
| |