| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2440 |
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| Symbol | nuoC |
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| ID | 6143204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2488931 |
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| End bp | 2490733 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641617312 |
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| Product | bifunctional NADH:ubiquinone oxidoreductase subunit C/D |
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| Protein accession | YP_001744484 |
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| Protein GI | 170682181 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7
[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C
[TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAACA ATATGACCGA CTTAACCGCG CAAGAACCCG CCTGGCAGAC CCGCGATCAT
CTTGATGATC CGGTGATTGG CGAACTGCGC AACCGTTTTG GGCCGGATGC CTTTACTGTT
CAGGCGACTC GCACCGGGGT TCCCGTTGTG TGGATCAAGC GTGAACAATT ACTGGAAGTT
GGCGATTTCT TAAAGAAACT GCCGAAACCT TACGTCATGC TGTTTGACTT ACACGGCATG
GACGAACGTC TGCGCACACA CCGCGAAGGG TTACCTGCCG CGGATTTTTC CGTTTTCTAC
CATCTGATTT CTATCGATCG TAACCGCGAC ATCATGCTGA AGGTGGCGCT GGCAGAAAAC
GACCTGCACG TACCGACCTT CACCAAACTG TTCCCGAACG CTAACTGGTA TGAGCGTGAG
ACCTGGGATC TGTTTGGCAT TACTTTCGAC GGTCATCCTA ATTTGCGCCG CATCATGATG
CCGCAAACCT GGAAAGGTCA TCCGCTGCGT AAAGATTACC CGGCACGCGC TACCGAATTC
TCGCCGTTTG AGCTGACCAA AGCCAAACAG GATCTGGAAA TGGAAGCCCT GACCTTCAAA
CCGGAAGAGT GGGGGATGAA GCGCGGCACC GAAAACGAGG ACTTCATGTT CCTCAACCTC
GGTCCGAACC ACCCGTCTGC GCACGGTGCT TTCCGTATCG TTTTGCAGCT CGATGGCGAA
GAGATTGTCG ACTGCGTACC AGACATCGGC TACCACCACC GTGGTGCGGA GAAAATGGGC
GAACGCCAGT CCTGGCATAG CTACATTCCG TATACCGACC GTATCGAATA CCTCGGCGGC
TGCGTTAACG AAATGCCTTA CGTGCTGGCG GTAGAGAAAC TGGCCGGGAT CACCGTGCCG
GATCGCGTTA ACGTCATTCG CGTAATGCTT TCTGAGCTGT TCCGCATCAA CAGCCATCTG
CTGTATATCT CCACCTTTAT TCAGGACGTC GGCGCGATGA CGCCAGTGTT CTTCGCCTTT
ACCGATCGTC AGAAAATTTA CGATCTGGTG GAAGCAATCA CGGGTTTTCG TATGCACCCG
GCGTGGTTCC GTATTGGCGG CGTAGCGCAC GACCTGCCGC GCGGCTGGGA TCGCCTGCTG
CGTGAGTTCC TCGACTGGAT GCCGAAACGT CTGGCGTCTT ACGAGAAAGC GGCGCTGCAA
AATACCATTC TGAAAGGTCG TTCCCAGGGC GTTGCCGCCT ATGGCGCGAA AGAGGCACTG
GAGTGGGGCA CCACTGGCGC GGGCCTGCGT GCTACCGGGA TCGACTTCGA CGTGCGTAAG
GCGCGTCCGT ATTCTGGCTA TGAAAACTTC GACTTTGAAA TCCCGGTGGG TGGTGGTGTT
TCTGACTGCT ACACCCGCGT AATGCTGAAA GTGGAAGAGC TGCGCCAGAG TCTGCGCATT
CTTGAGCAGT GCCTCAACAA CATGCCGGAA GGCCCGTTCA AAGCGGATCA CCCGCTGACC
ACGCCGCCGC CGAAAGAGCG CACGTTGCAA CATATCGAAA CCCTGATCAC CCACTTCCTG
CAAGTGTCGT GGGGTCCGGT GATGCCAGCC AATGAATCTT TCCAGATGAT TGAGGCGACC
AAGGGGATCA ACAGTTACTA CCTGACCAGC GACGGTAGCA CCATGAGTTA TCGCACCCGT
ATCCGTACGC CGAGTTATGC GCATTTGCAG CAAATTCCGG CGGCGATCCG CGGCAGCCTG
GTGTCTGACC TGATTGTTTA TCTGGGCAGT ATCGATTTTG TTATGTCAGA TGTGGACCGC
TAA
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| Protein sequence | MVNNMTDLTA QEPAWQTRDH LDDPVIGELR NRFGPDAFTV QATRTGVPVV WIKREQLLEV
GDFLKKLPKP YVMLFDLHGM DERLRTHREG LPAADFSVFY HLISIDRNRD IMLKVALAEN
DLHVPTFTKL FPNANWYERE TWDLFGITFD GHPNLRRIMM PQTWKGHPLR KDYPARATEF
SPFELTKAKQ DLEMEALTFK PEEWGMKRGT ENEDFMFLNL GPNHPSAHGA FRIVLQLDGE
EIVDCVPDIG YHHRGAEKMG ERQSWHSYIP YTDRIEYLGG CVNEMPYVLA VEKLAGITVP
DRVNVIRVML SELFRINSHL LYISTFIQDV GAMTPVFFAF TDRQKIYDLV EAITGFRMHP
AWFRIGGVAH DLPRGWDRLL REFLDWMPKR LASYEKAALQ NTILKGRSQG VAAYGAKEAL
EWGTTGAGLR ATGIDFDVRK ARPYSGYENF DFEIPVGGGV SDCYTRVMLK VEELRQSLRI
LEQCLNNMPE GPFKADHPLT TPPPKERTLQ HIETLITHFL QVSWGPVMPA NESFQMIEAT
KGINSYYLTS DGSTMSYRTR IRTPSYAHLQ QIPAAIRGSL VSDLIVYLGS IDFVMSDVDR
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