Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2424 |
Symbol | rnz |
ID | 6143119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 2470969 |
End bp | 2471904 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641617296 |
Product | ribonuclease Z |
Protein accession | YP_001744468 |
Protein GI | 170680744 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | [TIGR02649] ribonuclease BN [TIGR02651] ribonuclease Z |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.94801 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAACGTG ATGAACTCAT GGAATTAATT TTTTTAGGTA CTTCAGCCGG TGTGCCAACC CGTACGCGCA ATGTCACGGC AATATTGCTT AACCTGCAAC ATCCGACCCA GAGCGGTCTT TGGTTGTTTG ACTGCGGTGA AGGCACCCAG CATCAGCTAC TGCATACCGC CTTTAACCCT GGAAAACTGG ACAAGATTTT TATCAGTCAC CTTCATGGCG ATCATCTCTT TGGTTTACCC GGCTTGCTGT GCAGTCGTTC TATGTCTGGT ATTGTCCAAC CCTTAACGAT TTATGGTCCG CAAGGTATCC GTGAATTTGT GGAGACCGCG CTGCGGATTA GCGGCTCATG GACCGATTAT CCGCTGGAAA TTGTCGAAAT TGGCGCTGGC GAAATTTTCG ATGATGGCCT GCGCAAAGTG ACCGCTTATC CGCTGGAACA CCCACTGGAA TGCTATGGCT ATCGTATTGA AGAACATGAT AAACCGGGTG CATTAAATGC CCAGGCATTA AAAGCTGCTG GCGTACCGCC TGGCCCACTG TTTCAGGCAT TAAAAGCGGG CAAAACAATC ATGCTGGAAG ATGGAAGGCA GATTAACGGC GCAGATTACT TAGCCGCTCC AGTGCCAGGT AAAGCGCTCG CTATTTTCGG CGATACCGGC CCCTGCGATG CCGCACTTGA CCTGGCTAAA GGTGTCAATG TCATGGTGCA CGAAGCGACG CTGGATATAA CCATGGAAGC CAAAGCCAAT AGTCGCGGCC ACAGCTCTAC ACGCCAGGCT GCGACACTGG CCCGTGAGGC TGGAGTCGGT AAGCTAATCA TTACCCACGT CAGCTCGCGC TATGATGACA AAGGTTGTCA GCACCTGTTA CGTGAATGTC GGTCAATTTT CCCGGCGACT GAACTGGCGA ATGATTTCAC CGTGTTTAAC GTTTAA
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Protein sequence | MKRDELMELI FLGTSAGVPT RTRNVTAILL NLQHPTQSGL WLFDCGEGTQ HQLLHTAFNP GKLDKIFISH LHGDHLFGLP GLLCSRSMSG IVQPLTIYGP QGIREFVETA LRISGSWTDY PLEIVEIGAG EIFDDGLRKV TAYPLEHPLE CYGYRIEEHD KPGALNAQAL KAAGVPPGPL FQALKAGKTI MLEDGRQING ADYLAAPVPG KALAIFGDTG PCDAALDLAK GVNVMVHEAT LDITMEAKAN SRGHSSTRQA ATLAREAGVG KLIITHVSSR YDDKGCQHLL RECRSIFPAT ELANDFTVFN V
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