| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2384 |
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| Symbol | |
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| ID | 6144679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2427935 |
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| End bp | 2431699 |
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| Gene Length | 3765 bp |
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| Protein Length | 1254 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641617257 |
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| Product | adhesin |
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| Protein accession | YP_001744429 |
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| Protein GI | 170679991 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat
[TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.985186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGATTA TTTTTCTACG CAAGGAGTAT TTATCTTTAC TCCCGTCAAT GATTGCATCT
CTTTTCTCTG TTAACAGTGT CGCGGAGGTT TTGGATTCAT GCCAGGGATA TGATATCAAA
GCGAGTTGTC AGGCCAGCAG GCAAAGCCTT TCAGGCATTA CGCAGGACTG GAGCATCGCC
GATGGGCAAT GGGTGATTTT TTCGGGTATG GCCAATAATG CCAGCGGTGG TGCCGTATTT
TTGCAGCAAA GTGCTGAATT TACGATATCA CCACAAAATG AAACAGGGAT GACCCTGTTT
GCTAATAACT CGATTAGTGG CGAATATAAT AATGGCGGAG CTATCTTTGC TAAAGAAAAC
TCAACGATAA ATCTTGCGAA TGTTATTTTC GACAGTAACG TTGCAGGAGG CTATGGCGGA
GCAATCTATT CTGCGGGAAC AAACGATGCC GGTGATATGG ATTTAAATAT CACTAATGCA
ATATTTGCGA ATAATATCGC CAATGATGGT AAAGGTGGCG CTATTTATTC TATCAATAAT
GATATTTATT TAAGTGATGT CATTTTTGAT AATAATCAGG CATATACATC AACCAGCTAT
AGTGATGGGG ACGGCGGTGC CATTGATGTT ACGGATAATA GTACGGATAA CACACATCTT
TCAGGAAAAA CGATAATTAA TAATACCTCC TTTACCAATA ACTATGCAGA AGGTTATGGC
GGAGCAATTT ATACCAGCAG CACCACATCC CCGTATCTTA TTGATATTTC TGTTGATGAT
AATTATGACC AAAACAATGG TGTGATGATT GATGAAAATA ACAGCGCCTC GGGATATGAC
CATTCGGCGA CGGCAGCGGC GGGGGGCTTT ATGTATATCG GTCATAGTGT GGCTGAATTT
AACATTGCCG CCGATAAAAC GCTGGTAATA GGCAATACCA GCAACGATGG CGCGATTGAT
TCTCTTGCCG GAACGGGAGT CATCGTGAAA GAGGGAGCGG GAGAGTTAGT CCTCAATGCC
GACAATAATG CGTTTACCGG CGAGATGAGT ATCCAGAATG GCGAGGTGAC GCTGGGGCGC
AGCGATGAGT TAATGAATGT CGGCGACACG CACTGTCAGA GCGATCCGCA GGATTGCTTT
GGTCTGATGG TCGGCAGCAC TGTTCATTCT GAGTATCAGG CAGAACTGAA TGTTGGCAAT
ACACAACAAA CGTTTGTGCA CTCATTAACC GGTTTTGCTA ATGGCATTTT GAATATCGAC
GCAGGCGGCA ATGTTACCGT AAACCAGGGC GGTTTTTCCG GCTCGATTCA GGGTGAAGGA
CAGTTGACGG TAGCGCAAGA TGGCAGCTAT CTCCTGACAG GGGAGCAGTC GATGGCATTA
ACCGGCGATA TTGTGGTGGA AGATAACGCC GTATTGTCGC TAGCGGGGAA TCAGGCCGAT
TTACGGGCAA TGCAGAGCGA TCCGCAATCG ATCGTGCTAA ATGGCGGAGT ATTGGATCTC
TCTGATTTCA CCACTTGGGA TGGCGATAGC TCATACAATG ACGGTCTGCA AATCAGCGGC
AGTGGGGGGA CAGTGATTGG CAGTAATGAT GTCGTTGATA TCAGCAGTGG CGATGATTTA
CATATTGGCG GCAGTGATGC CAGCCAGAAT GGCGTTTATG TCGTCATTAA TGCGGGGGAT
CAGCGCGTAA CGCTGGCGAA TAACAACGGT TATCTCGGTA ATACGCAAAT CGCCTCCGGT
ACGCTTGAAG TCAGCGATAA TTCGCAATTG GGGGACACAA GTTACAACCG TTCAGTGATC
TTCACAGATC CCCAACAACA CAGTGAAATG GATGTGACGA CTGATGTTGA CACTCGCTCG
GCTACAACAG GTCAGGGCAG GAATATTGAA ATGCGCGCTG ATGGCGAAAT ACACGTTGAG
GATGGCGTAG ATACGCAATG GGGCGGGTTG ATGGCGGATA GTACCGGGCA ACAACTGGAT
AGCGTAAGCA CGTTGACTAA AAGTGGCGGC GGGACGCTGG AGTTGACCGC CAGCGGCACT
GCGACGTCTG CGGTACGTGT GGAGGACGGA ACGCTAAAAG GTGAAGCGGA GAATATTATT
CCTTATGTTT CTTCACTGTG GGTGGGGGAA GACGGTGTTT TTGAAACCGG GAAAAATCAG
GATATTCGTT CAATCGATGC CACCTCTGGC GGCGATATCG ACATAACCGA TGGTACTGTG
TTGCGATTGA CGCAGCAGGA TACGAACCAG GCGCTGGATG CCTCGCTGTT TAGCGGCGAC
GGTACGTTGG TGAATGCCAC CGATGGTGTG ACGCTGACAG GCGAGCTTAA TACCAACCTT
GAAACTGACA GCCTGACTTA TCTTTCAGAC GTGACGGTCA ATGGTGATCT AACTAATACT
TCCGGTGCTG TCAGTCTGCA AAATGGCGTT GCTGGCGACA CGCTCACGGT AAACGGTGAT
TACACCGGTG GCGGTACGTT GTTTCTCGAC AGCGAATTAA ACGGCGATGA CTCGGCAAGC
GACCAACTGG TGTTGAACGG TAATACTGCT GGCAACACGA CCGTGGTAAT TAATCCCATT
ACGGGTATTG GTGAGCCGAC ATCTACGGGC ATTAAAGTGG TTGATTTCGC AGCCGATCCA
ACGCAATTTC AAAACAATGC GCAGTTCAGT CTGGCGGGCA GCGGCTACGT CAATATGGGA
GCGTATGACT ACACGCTGGT GGAAGATAAC AACGACTGGT ATCTGCGATC GCAAGAAGTA
ACGCCACCAT CGCCACCTGA TCCAGACCCG ACTCCAGATC CTGATCCTAC GCCGGATCCT
GATCCAACAC CCGACCCGGC TCCAGCCCCT ACGCCTGCCT ACCAGCCGGT GCTGAATGCC
AAAGTTGGTG GCTATCTCAA TAACCTACGT GCGGCAAATC AGGCATTTGT GATGGAGCGA
CGCGATCACG CTGGTGGCGA TGGTCAGACG CTGAATTTAC GTGTTATCGG CGGAGATTAT
CATTACACAG CAGCGGGGCA ACTGGCTCAG CATGAAGACA CTTCTACGGT GCAGCTTAGC
GGCGACTTGT TTAGCGGGCG CTGGGGCATG GATGGCGAGT GGATGCTTGG GGCGGTTGGT
GGCTACAGTG ATAACCAGGG CGACAGCCGC TCGAATATGA CCGGAACTCG CGCCGATAAC
CAGAACCACG GTTATGCCGT TGGTCTGACC TCAAGCTGGT TCCAGCACGG TAATCAGAAG
CAGGGGGCCT GGCTGGATAG CTGGCTGCAA TACGCGTGGT TTAACAATGA TGTTTCCGAA
CATGAAGATG GCGCGGATCA TTACCACTCA TCGGGGATTA TCGCCTCGCT GGAAGCCGGG
TATCAGTGGT TACCGGGGCA TGGAGTGGTG ATTGAACCAC AGGCGCAGGT GATTTATCAG
GGCGTGCAGC AGGATGATTT TACCGCCGCT AACCATGCGC GGGTGTCACA ATCGCAGGGT
GATGATATTC AAACGCGGCT GGGTTTACAC AGCGAATGGC GTACCGCGGT TGGTGTCATA
CCAACATTAG ATCTGAATTA TTATCACGAT CCCCATGCGA CGGAAATTGA AGAAGATGGC
AGCACTATCA GTGACGATGC GGTGAAGCAA CGGGGTGAAA TAAAAGTGGG AATAACGGGC
AATATCAGTC AGCGAGTTTC GCTGCGTGGT AGCGTGGCGT GGCAGAAAGG GAGTGATGAT
TTTGCCCAGA CGGCAGGGTT TTTGTCGATG ACAGTGAAAT GGTAA
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| Protein sequence | MRIIFLRKEY LSLLPSMIAS LFSVNSVAEV LDSCQGYDIK ASCQASRQSL SGITQDWSIA
DGQWVIFSGM ANNASGGAVF LQQSAEFTIS PQNETGMTLF ANNSISGEYN NGGAIFAKEN
STINLANVIF DSNVAGGYGG AIYSAGTNDA GDMDLNITNA IFANNIANDG KGGAIYSINN
DIYLSDVIFD NNQAYTSTSY SDGDGGAIDV TDNSTDNTHL SGKTIINNTS FTNNYAEGYG
GAIYTSSTTS PYLIDISVDD NYDQNNGVMI DENNSASGYD HSATAAAGGF MYIGHSVAEF
NIAADKTLVI GNTSNDGAID SLAGTGVIVK EGAGELVLNA DNNAFTGEMS IQNGEVTLGR
SDELMNVGDT HCQSDPQDCF GLMVGSTVHS EYQAELNVGN TQQTFVHSLT GFANGILNID
AGGNVTVNQG GFSGSIQGEG QLTVAQDGSY LLTGEQSMAL TGDIVVEDNA VLSLAGNQAD
LRAMQSDPQS IVLNGGVLDL SDFTTWDGDS SYNDGLQISG SGGTVIGSND VVDISSGDDL
HIGGSDASQN GVYVVINAGD QRVTLANNNG YLGNTQIASG TLEVSDNSQL GDTSYNRSVI
FTDPQQHSEM DVTTDVDTRS ATTGQGRNIE MRADGEIHVE DGVDTQWGGL MADSTGQQLD
SVSTLTKSGG GTLELTASGT ATSAVRVEDG TLKGEAENII PYVSSLWVGE DGVFETGKNQ
DIRSIDATSG GDIDITDGTV LRLTQQDTNQ ALDASLFSGD GTLVNATDGV TLTGELNTNL
ETDSLTYLSD VTVNGDLTNT SGAVSLQNGV AGDTLTVNGD YTGGGTLFLD SELNGDDSAS
DQLVLNGNTA GNTTVVINPI TGIGEPTSTG IKVVDFAADP TQFQNNAQFS LAGSGYVNMG
AYDYTLVEDN NDWYLRSQEV TPPSPPDPDP TPDPDPTPDP DPTPDPAPAP TPAYQPVLNA
KVGGYLNNLR AANQAFVMER RDHAGGDGQT LNLRVIGGDY HYTAAGQLAQ HEDTSTVQLS
GDLFSGRWGM DGEWMLGAVG GYSDNQGDSR SNMTGTRADN QNHGYAVGLT SSWFQHGNQK
QGAWLDSWLQ YAWFNNDVSE HEDGADHYHS SGIIASLEAG YQWLPGHGVV IEPQAQVIYQ
GVQQDDFTAA NHARVSQSQG DDIQTRLGLH SEWRTAVGVI PTLDLNYYHD PHATEIEEDG
STISDDAVKQ RGEIKVGITG NISQRVSLRG SVAWQKGSDD FAQTAGFLSM TVKW
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