Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2379 |
Symbol | gyrA |
ID | 6147048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2420390 |
End bp | 2423017 |
Gene Length | 2628 bp |
Protein Length | 875 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641617252 |
Product | DNA gyrase subunit A |
Protein accession | YP_001744424 |
Protein GI | 170681961 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.076856 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACC TTGCGAGAGA AATTACACCG GTCAACATTG AGGAAGAGCT GAAGAGCTCC TATCTGGATT ATGCGATGTC GGTCATTGTT GGCCGTGCGC TGCCGGATGT CCGAGATGGC CTGAAGCCGG TACACCGTCG CGTACTTTAC GCCATGAACG TACTAGGCAA TGACTGGAAC AAAGCCTATA AAAAATCTGC CCGTGTCGTT GGTGACGTAA TCGGTAAATA CCATCCCCAT GGTGACTTGG CGGTTTATAA CACGATCGTC CGTATGGCGC AGCCATTCTC GCTGCGTTAC ATGCTGGTAG ACGGTCAGGG TAACTTCGGT TCCATCGACG GCGACTCTGC GGCGGCAATG CGTTATACGG AAATCCGTCT GGCGAAAATT GCCCATGAAC TGATGGCCGA TCTCGAAAAA GAGACGGTCG ATTTCGTTGA TAACTATGAC GGCACGGAAA AAATTCCGGA CGTCATGCCA ACCAAAATTC CTAACCTGCT GGTGAACGGT TCTTCCGGTA TCGCCGTAGG TATGGCAACC AACATCCCGC CGCACAACCT GACGGAAGTC ATCAACGGTT GTCTGGCGTA TATCGATGAT GAAGACATCA GCATTGAAGG GCTGATGGAA CACATCCCGG GGCCGGACTT CCCGACGGCG GCAATCATTA ACGGTCGTCG CGGTATTGAA GAAGCTTACC GTACCGGTCG TGGCAAGGTG TATATCCGCG CCCGTGCGGA AGTGGAAGTT GACGCCAAAA CCGGGCGTGA AACCATTATC GTCCACGAAA TTCCGTATCA GGTGAACAAA GCTCGCCTGA TCGAAAAAAT TGCGGAACTG GTAAAAGAAA AACGCGTGGA AGGTATCAGC GCGCTGCGTG ACGAGTCTGA CAAAGACGGT ATGCGCATCG TGATTGAAGT GAAACGCGAT GCGGTCGGTG AAGTGGTGCT CAACAACCTC TATTCCCAGA CCCAGTTGCA GGTTTCTTTC GGTATTAACA TGGTGGCATT GCACCATGGT CAGCCGAAGA TCATGAACCT GAAAGACATC ATCGCGGCGT TTGTTCGTCA CCGCCGTGAA GTGGTGACCC GTCGTACTAT TTTCGAACTG CGTAAAGCGC GCGATCGTGC TCATATCCTT GAAGCATTAG CCGTCGCGCT GGCAAACATT GACCCGATCA TCGAACTGAT CCGTCATGCG CCGACGCCTG CAGAAGCGAA AACGGCGCTG GTTGCTAATC CGTGGCAGCT GGGCAACGTT GCCGCGATGC TGGAACGAGC CGGCGACGAT GCTGCGCGTC CGGAATGGCT GGAGCCAGAG TTCGGCGTGC GTGACGGTCT GTACTACCTG ACCGAACAGC AAGCTCAGGC GATTCTGGAT CTGCGTTTGC AGAAACTGAC CGGCCTTGAG CACGAAAAAC TGCTCGACGA ATACAAAGAG CTGCTGGATC AGATCGCGGA ACTGTTGCGT ATTCTTGGTA GCGCCGATCG TCTGATGGAA GTGATCCGCG AAGAGCTGGA GCTGGTTCGT GAACAGTTCG GTGACAAACG TCGTACTGAA ATCACCGCCA ACAGCGCAGA CATCAACCTG GAAGATCTGA TCACCCAGGA AGATGTGGTC GTGACGCTCT CTCACCAGGG CTACGTTAAA TATCAGCCGC TTTCTGAATA CGAAGCGCAG CGTCGTGGCG GGAAAGGTAA ATCTGCCGCA CGTATTAAAG AAGAAGACTT TATCGACCGA CTGCTGGTGG CGAATACCCA CGACCATATT CTGTGCTTCT CCAGCCGTGG TCGCGTCTAT TCGATGAAGG TTTACCAGTT GCCAGAAGCT ACTCGTGGCG CGCGCGGTCG TCCGATCGTC AACCTGCTGC CGCTGGAGCA GGACGAACGT ATCACCGCGA TCCTGCCGGT GACCGAGTTT GAAGAAGGCG TGAAAGTCTT CATGGCCACC GCTAACGGGA CCGTGAAGAA AACCGTCCTC ACCGAATTCA ACCGTCTGCG TACCGCCGGT AAAGTGGCGA TCAAACTGGT TGATGGCGAT GAGCTGATCG GCGTTGACCT GACCAGCGGC GAAGATGAAG TAATGCTGTT CTCCGCCGAA GGTAAAGTGG TGCGCTTTAA AGAGTCTTCT GTCCGTGCGA TGGGCTGCAA CACCACCGGT GTTCGCGGTA TTCGTTTAGG CGAAGGCGAT AAAGTCGTCT CTCTGATCGT ACCTCGTGGT GATGGCGCAA TCCTCACCGC AACGCAGAAC GGTTATGGTA AACGTACCGC AGTGGCGGAA TACCCAACCA AGTCGCGTGC GACGAAAGGG GTTATCTCCA TCAAGGTTAC CGAACGTAAC GGTTTAGTGG TTGGCGCGGT GCAGGTAGAT GACTGCGACC AGATCATGAT GATCACCGAT GCCGGTACGC TGGTACGTAC TCGCGTTTCA GAAATCAGCA TCGTGGGCCG TAACACCCAG GGCGTGATCC TCATCCGTAC TGCGGAAGAT GAAAACGTAG TGGGTCTGCA ACGTGTTGCT GAACCGGTTG ACGAGGAAGA TCTGGATACC ATCGACGGCA GTGCCGCGGA AGGGGACGAT GAAATCGCTC CGGAAGTGGA CGTTGACGAC GAGCCAGAAG AAGAATAA
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Protein sequence | MSDLAREITP VNIEEELKSS YLDYAMSVIV GRALPDVRDG LKPVHRRVLY AMNVLGNDWN KAYKKSARVV GDVIGKYHPH GDLAVYNTIV RMAQPFSLRY MLVDGQGNFG SIDGDSAAAM RYTEIRLAKI AHELMADLEK ETVDFVDNYD GTEKIPDVMP TKIPNLLVNG SSGIAVGMAT NIPPHNLTEV INGCLAYIDD EDISIEGLME HIPGPDFPTA AIINGRRGIE EAYRTGRGKV YIRARAEVEV DAKTGRETII VHEIPYQVNK ARLIEKIAEL VKEKRVEGIS ALRDESDKDG MRIVIEVKRD AVGEVVLNNL YSQTQLQVSF GINMVALHHG QPKIMNLKDI IAAFVRHRRE VVTRRTIFEL RKARDRAHIL EALAVALANI DPIIELIRHA PTPAEAKTAL VANPWQLGNV AAMLERAGDD AARPEWLEPE FGVRDGLYYL TEQQAQAILD LRLQKLTGLE HEKLLDEYKE LLDQIAELLR ILGSADRLME VIREELELVR EQFGDKRRTE ITANSADINL EDLITQEDVV VTLSHQGYVK YQPLSEYEAQ RRGGKGKSAA RIKEEDFIDR LLVANTHDHI LCFSSRGRVY SMKVYQLPEA TRGARGRPIV NLLPLEQDER ITAILPVTEF EEGVKVFMAT ANGTVKKTVL TEFNRLRTAG KVAIKLVDGD ELIGVDLTSG EDEVMLFSAE GKVVRFKESS VRAMGCNTTG VRGIRLGEGD KVVSLIVPRG DGAILTATQN GYGKRTAVAE YPTKSRATKG VISIKVTERN GLVVGAVQVD DCDQIMMITD AGTLVRTRVS EISIVGRNTQ GVILIRTAED ENVVGLQRVA EPVDEEDLDT IDGSAAEGDD EIAPEVDVDD EPEEE
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