| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2364 |
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| Symbol | ompC |
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| ID | 6145314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2395366 |
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| End bp | 2396460 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641617237 |
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| Product | outer membrane porin protein C |
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| Protein accession | YP_001744409 |
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| Protein GI | 170680935 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0333811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTTA AAGTACTGTC CCTCCTGGTC CCAGCTCTGC TGGTAGCAGG CGCAGCAAAC
GCTGCTGAAA TTTACAACAA AGACGGCAAC AAATTAGATC TGTACGGTAA AGTTGACGGC
CTGCACTATT TCTCCGATAA CGACTCTAAA GATGGCGACA AGACCTACAT GCGTCTTGGC
TTCAAAGGTG AAACTCAGGT TACTGATCAA CTGACCGGTT ATGGTCAGTG GGAATATCAG
ATTCAAGGTA ACGAACCTGA AAGTGACAAT AGTTCCTGGA CCCGTGTGGC ATTCGCTGGT
CTGAAATTCC AGGACGTTGG TTCTTTTGAC TATGGTCGTA ACTACGGCGT TGTTTACGAT
GTTACTTCCT GGACCGACGT ACTGCCAGAA TTCGGTGGTG ATACCTACGA TTCTGATAAC
TTCATGCAGC AGCGTGGTAA CGGTTTCGCG ACCTACCGTA ACACCGACTT CTTCGGTCTG
GTTGACGGTC TTGATTTTGC TGTTCAGTAT CAGGGTAAAA ACGGTAGTGC TCATGGCGAA
GGTATGACCA CTAATGGCCG TGATGATGTA TTTGAGCAGA ACGGTGACGG TGTTGGTGGT
TCTATTACTT ACAATTATGA AGGCTTTGGT ATCGGTGCTG CAGTTTCCAG CTCCAAACGT
ACCTGGGATC AGAACAACAC TGGCCTGATC GGTACTGGCG ACCGTGCTGA AACCTACACT
GGTGGTCTGA AATACGACGC TAACAACATC TACCTGGCTG CTCAGTACAC CCAGACCTAC
AACGCAACTC GCGTAGGTTC CCTGGGTTGG GCGAACAAAG CACAGAACTT CGAAGCTGTT
GCTCAGTACC AGTTCGACTT CGGTCTGCGT CCGTCCCTGG CTTACCTGCA GTCTAAAGGT
AAAAACCTGG GTCGTGGCTA CGACGACGAA GATATCCTGA AATATGTTGA TGTTGGTGCG
ACCTACTACT TCAACAAAAA CATGTCCACC TACGTTGACT ACAAAATCAA CCTGCTGGAC
GACAACCAGT TCACCCGCGC TGCTGGCATC AACACTGATG ACATCGTAGC TCTGGGTCTG
GTTTACCAGT TCTAA
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| Protein sequence | MKVKVLSLLV PALLVAGAAN AAEIYNKDGN KLDLYGKVDG LHYFSDNDSK DGDKTYMRLG
FKGETQVTDQ LTGYGQWEYQ IQGNEPESDN SSWTRVAFAG LKFQDVGSFD YGRNYGVVYD
VTSWTDVLPE FGGDTYDSDN FMQQRGNGFA TYRNTDFFGL VDGLDFAVQY QGKNGSAHGE
GMTTNGRDDV FEQNGDGVGG SITYNYEGFG IGAAVSSSKR TWDQNNTGLI GTGDRAETYT
GGLKYDANNI YLAAQYTQTY NATRVGSLGW ANKAQNFEAV AQYQFDFGLR PSLAYLQSKG
KNLGRGYDDE DILKYVDVGA TYYFNKNMST YVDYKINLLD DNQFTRAAGI NTDDIVALGL
VYQF
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