| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2363 |
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| Symbol | apbE |
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| ID | 6143331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2394199 |
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| End bp | 2395254 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641617236 |
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| Product | thiamine biosynthesis lipoprotein ApbE |
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| Protein accession | YP_001744408 |
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| Protein GI | 170681131 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.643512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATAA GCTTTACCCG CGTGGCACTG CTGGCTGCCG CGCTCTTCTT TGTTGGTTGC
GATCAAAAAC CACAACCCGC CAAAACCCAC GCTACTGAAG TTACCGTTCT TGAAGGCAAA
ACCATGGGTA CCTTCTGGCG TGCCAGCATC CCGGGCATTG ATGCCAAACG CAGTGCCGAA
CTTAAAGAAA AGATTCAGAC CCAGCTGGAC GCCGACGATC AGCTGCTTTC GACCTATAAA
AAAGATTCCG CGCTGATGCG CTTTAACGAC TCGCAAAGTT TGTCGCCGTG GCCGGTAAGT
GAAGCGATGG CCGATATCGT CACCACCTCG CTGCGCATTG GCGCAAGGAC CGATGGTGCG
ATGGATATAA CCGTCGGGCC GCTGGTGAAT CTGTGGGGCT TTGGCCCGGA ACAACAGCCG
GTTCAAATTC CGAGTCAGGA ACAGATCGAT GCGATGAAAG CCAAAACCGG CTTACAGCAC
CTGACGGTGA TTAATCAGTC CCACCAGCAA TATCTGCAAA AAGACCTGCC GGATTTATAT
GTCGATCTCT CTACCGTCGG TGAAGGTTAT GCGGCGGATC ATCTGGCACG CTTGATGGAG
CAGGAAGGGA TTTCCCGCTA TCTGGTGTCG GTGGGCGGCG CGCTGAACAG CCGTGGTATG
AACGGTGAAG GCCAGCCGTG GCGAGTGGCG ATTCAAAAAC CAACCGATAA AGAAAACGCG
GTTCAGGCGG TGGTGGATAT CAACGGCCAC GGTATCAGCA CCTCCGGCAG CTATCGCAAC
TATTACGAAC TGGACGGCAA ACGTCTTTCT CATGTTATCG ATCCGCAAAC CGGGCGTCCC
ATTGAACATA ATCTGGTATC CGTGACGGTG ATTGCCCCGA CGGCGCTGGA AGCCGACGCC
TGGGACACAG GTTTGATGGT GCTCGGGCCG GATAAAGCCA AAGAAGTTGT TCGCCGGGAA
GGGCTGGCGG TCTATATGAT CACCAAAGAG GGCGATAGCT TTAAAACCTG GATGTCGCCG
CAGTTTAAAA GCTTCCTTAT CAGCGAAAAA AATTAA
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| Protein sequence | MEISFTRVAL LAAALFFVGC DQKPQPAKTH ATEVTVLEGK TMGTFWRASI PGIDAKRSAE
LKEKIQTQLD ADDQLLSTYK KDSALMRFND SQSLSPWPVS EAMADIVTTS LRIGARTDGA
MDITVGPLVN LWGFGPEQQP VQIPSQEQID AMKAKTGLQH LTVINQSHQQ YLQKDLPDLY
VDLSTVGEGY AADHLARLME QEGISRYLVS VGGALNSRGM NGEGQPWRVA IQKPTDKENA
VQAVVDINGH GISTSGSYRN YYELDGKRLS HVIDPQTGRP IEHNLVSVTV IAPTALEADA
WDTGLMVLGP DKAKEVVRRE GLAVYMITKE GDSFKTWMSP QFKSFLISEK N
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