Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2350 |
Symbol | napC |
ID | 6146402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2381942 |
End bp | 2382544 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641617223 |
Product | cytochrome c-type protein NapC |
Protein accession | YP_001744395 |
Protein GI | 170683912 |
COG category | [C] Energy production and conversion |
COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
TIGRFAM ID | [TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAATT CTGACCGTAA GCCTGGTCTG ATTAAGCGCC TGTGGAAATG GTGGCGTACC CCCAGCCGTT TGGCGCTGGG GACGCTACTG TTGATCGGTT TTGTCGGCGG CATCGTCTTC TGGGGCGGCT TTAACACCGG GATGGAAAAA GCCAATACCG AAGAGTTCTG CATTAGCTGC CACGAAATGC GTAACACGGT GTATCAGGAA TACATGGATT CCGTGCACTA CAACAACCGT AGCGGCGTTC GTGCGACCTG TCCGGATTGT CACGTTCCGC ACGAGTTTGT GCCGAAGATG ATACGCAAGC TCAAAGCAAG TAAAGAGCTG TATGGTAAAA TTTTTGGCGT TATTGACACG CCGCAGAAAT TTGAAGCTCA TCGCCTGACG ATGGCACAGA ATGAGTGGCG GCGCATGAAG GACAATAACT CGCAGGAGTG CCGTAACTGT CACAACTTCG AGTATATGGA TACAACCGCC CAGAAATCGG TTGCCGCGAA GATGCATGAC CAGGCGGTGA AAGATGGGCA AACCTGTATT GATTGCCATA AAGGGATAGC GCACAAGCTG CCCGATATGC GCGAAGTCGA GCCAGGTTTT TAA
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Protein sequence | MGNSDRKPGL IKRLWKWWRT PSRLALGTLL LIGFVGGIVF WGGFNTGMEK ANTEEFCISC HEMRNTVYQE YMDSVHYNNR SGVRATCPDC HVPHEFVPKM IRKLKASKEL YGKIFGVIDT PQKFEAHRLT MAQNEWRRMK DNNSQECRNC HNFEYMDTTA QKSVAAKMHD QAVKDGQTCI DCHKGIAHKL PDMREVEPGF
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