Gene EcSMS35_2350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2350 
SymbolnapC 
ID6146402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2381942 
End bp2382544 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content52% 
IMG OID641617223 
Productcytochrome c-type protein NapC 
Protein accessionYP_001744395 
Protein GI170683912 
COG category[C] Energy production and conversion 
COG ID[COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit 
TIGRFAM ID[TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAATT CTGACCGTAA GCCTGGTCTG ATTAAGCGCC TGTGGAAATG GTGGCGTACC 
CCCAGCCGTT TGGCGCTGGG GACGCTACTG TTGATCGGTT TTGTCGGCGG CATCGTCTTC
TGGGGCGGCT TTAACACCGG GATGGAAAAA GCCAATACCG AAGAGTTCTG CATTAGCTGC
CACGAAATGC GTAACACGGT GTATCAGGAA TACATGGATT CCGTGCACTA CAACAACCGT
AGCGGCGTTC GTGCGACCTG TCCGGATTGT CACGTTCCGC ACGAGTTTGT GCCGAAGATG
ATACGCAAGC TCAAAGCAAG TAAAGAGCTG TATGGTAAAA TTTTTGGCGT TATTGACACG
CCGCAGAAAT TTGAAGCTCA TCGCCTGACG ATGGCACAGA ATGAGTGGCG GCGCATGAAG
GACAATAACT CGCAGGAGTG CCGTAACTGT CACAACTTCG AGTATATGGA TACAACCGCC
CAGAAATCGG TTGCCGCGAA GATGCATGAC CAGGCGGTGA AAGATGGGCA AACCTGTATT
GATTGCCATA AAGGGATAGC GCACAAGCTG CCCGATATGC GCGAAGTCGA GCCAGGTTTT
TAA
 
Protein sequence
MGNSDRKPGL IKRLWKWWRT PSRLALGTLL LIGFVGGIVF WGGFNTGMEK ANTEEFCISC 
HEMRNTVYQE YMDSVHYNNR SGVRATCPDC HVPHEFVPKM IRKLKASKEL YGKIFGVIDT
PQKFEAHRLT MAQNEWRRMK DNNSQECRNC HNFEYMDTTA QKSVAAKMHD QAVKDGQTCI
DCHKGIAHKL PDMREVEPGF