| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2322 |
|---|
| Symbol | |
|---|
| ID | 6144317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 2353487 |
|---|
| End bp | 2354473 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641617196 |
|---|
| Product | CobW/P47K family protein |
|---|
| Protein accession | YP_001744369 |
|---|
| Protein GI | 170681990 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0523] Putative GTPases (G3E family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.366233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.00913363 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACCAGAA CCAACCTCAT CACCGGTTTT CTCGGCAGCG GGAAAACTAC GTCGATTCTT
CATCTGTTAG CCCATAAAGA TCCCAACGAA AAATGGGCGG TACTGGTTAA TGAATTTGGG
GAAGTCGGAA TTGATGGTGC TTTGCTCGCC GATAGCGGCG CATTGTTGAA AGAGATCCCC
GGCGGCTGTA TGTGCTGCGT TAATGGTTTA CCCATGCAGG TAGGGTTGAA TACCTTACTG
CGTCAGGGAA AACCAGACCG CTTGTTGATA GAGCCGACCG GGCTGGGCCA TCCGAAACAG
ATCCTCGATC TCTTAACCGC GCCCGTGTAT GAACCGTGGA TAGATCTGCG CGCCACGTTG
TGCATTCTCG ATCCACGCCT GCTGCTGGAC GAAAAAAGCG CCAGCAATGA AAACTTCCGT
GACCAGCTGG CTGCCGCAGA CATTATTGTC GCCAATAAAT CCGACCGTGC GACGCCCGAA
AGTGAGCAAG CGCTACAGCG CTGGTGGCAG CAAAATGGTG GCGATCGGCA ATTAATTCAC
AGCGCGCATG GGAAAGTTGA CGGTCATCTT CTGGATTTGC CGCGTCGCAA TTTAGCCGAG
TTGCCCGCCA GCGCCGCGCA TTCTCATCAG CATGTCGTGA AAAAAGGGTT AGCAGCGTTA
AGCCTGCCAG AGCATCAACG CTGGCGTCGC AGTCTGAACA GCGGGCAAGG ATATCAGGCC
TGCGGCTGGA TATTCGACGC TGATACGGTA TTCGACACCA TTGGCATTCT GGAATGGGCG
CGACTTGCAC CGGTAGAACG CGTCAAAGGC GTGCTGCGTA TTCCCGAAGG GCTGGTGCGA
ATCAACCGTC AGGGCGATGA CCTGCACATT GAAACGCAAA ACGTTGCGCC ACCGGACAGC
CGTATTGAGC TGATTTCCAG CAGCGAAGCT GACTGGAATG CCTTGCAGAG CGCGCTGTTG
AAGCTTCGTT TAGCGACTAC CGCGTAA
|
|---|
| Protein sequence | MTRTNLITGF LGSGKTTSIL HLLAHKDPNE KWAVLVNEFG EVGIDGALLA DSGALLKEIP
GGCMCCVNGL PMQVGLNTLL RQGKPDRLLI EPTGLGHPKQ ILDLLTAPVY EPWIDLRATL
CILDPRLLLD EKSASNENFR DQLAAADIIV ANKSDRATPE SEQALQRWWQ QNGGDRQLIH
SAHGKVDGHL LDLPRRNLAE LPASAAHSHQ HVVKKGLAAL SLPEHQRWRR SLNSGQGYQA
CGWIFDADTV FDTIGILEWA RLAPVERVKG VLRIPEGLVR INRQGDDLHI ETQNVAPPDS
RIELISSSEA DWNALQSALL KLRLATTA
|
|---|
| |