Gene EcSMS35_2289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2289 
Symbol 
ID6145546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2316905 
End bp2317600 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content53% 
IMG OID641617163 
Producthypothetical protein 
Protein accessionYP_001744336 
Protein GI170679809 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1346] Putative effector of murein hydrolase 
TIGRFAM ID[TIGR00659] conserved hypothetical protein TIGR00659 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.00561985 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGGCGA ATATCTGGTG GTCATTACCG CTGACATTGA TTGTCTTTTT TGCCGCCCGC 
AAACTGGCGG CACGGTATAA GTTTCCCTTG CTTAACCCGT TGCTGGTAGC AATGGTGGTG
ATCATTCCTT TTTTAATGCT GACCGGCATC TCTTACGACA GCTACTTTAA AGGTAGCGAA
GTGCTAAACG ATCTGCTGCA ACCGGCGGTC GTTGCGCTGG CCTATCCTTT ATATGAGCAG
CTACACCAGA TCCGCGCGCG CTGGAAATCG ATCATCACCA TCTGTTTTAT CGGCAGCGTG
GTTGCGATGG TGACGGGGAC TTCCGTGGCA TTGTTGATGG GCGCTTCACC GGAAATCGCC
GCGTCAATCC TGCCGAAATC AGTCACCACG CCTATTGCAA TGGCGGTTGG CGGCAGTATT
GGCGGTATTC CGGCAATCAG CGCAGTTTGC GTGATTTTCG TCGGTATTCT GGGCGCAGTG
TTTGGTCATA CGTTACTTAA TGCGATGCGT ATTCGCACCA AAGCAGCGCG CGGTCTGGCG
ATGGGGACAG CCTCGCACGC CCTCGGTACG GCACGCTGTG CTGAGCTGGA TTATCAGGAA
GGTGCATTTA GTTCGCTGGC GCTGGTGTTA TGCGGGATTA TTACTTCGCT GATCGCACCG
TTCCTTTTCC CGATTATTCT GGCAGTAATG GGCTAA
 
Protein sequence
MMANIWWSLP LTLIVFFAAR KLAARYKFPL LNPLLVAMVV IIPFLMLTGI SYDSYFKGSE 
VLNDLLQPAV VALAYPLYEQ LHQIRARWKS IITICFIGSV VAMVTGTSVA LLMGASPEIA
ASILPKSVTT PIAMAVGGSI GGIPAISAVC VIFVGILGAV FGHTLLNAMR IRTKAARGLA
MGTASHALGT ARCAELDYQE GAFSSLALVL CGIITSLIAP FLFPIILAVM G