Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2289 |
Symbol | |
ID | 6145546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 2316905 |
End bp | 2317600 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641617163 |
Product | hypothetical protein |
Protein accession | YP_001744336 |
Protein GI | 170679809 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1346] Putative effector of murein hydrolase |
TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.00561985 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGGCGA ATATCTGGTG GTCATTACCG CTGACATTGA TTGTCTTTTT TGCCGCCCGC AAACTGGCGG CACGGTATAA GTTTCCCTTG CTTAACCCGT TGCTGGTAGC AATGGTGGTG ATCATTCCTT TTTTAATGCT GACCGGCATC TCTTACGACA GCTACTTTAA AGGTAGCGAA GTGCTAAACG ATCTGCTGCA ACCGGCGGTC GTTGCGCTGG CCTATCCTTT ATATGAGCAG CTACACCAGA TCCGCGCGCG CTGGAAATCG ATCATCACCA TCTGTTTTAT CGGCAGCGTG GTTGCGATGG TGACGGGGAC TTCCGTGGCA TTGTTGATGG GCGCTTCACC GGAAATCGCC GCGTCAATCC TGCCGAAATC AGTCACCACG CCTATTGCAA TGGCGGTTGG CGGCAGTATT GGCGGTATTC CGGCAATCAG CGCAGTTTGC GTGATTTTCG TCGGTATTCT GGGCGCAGTG TTTGGTCATA CGTTACTTAA TGCGATGCGT ATTCGCACCA AAGCAGCGCG CGGTCTGGCG ATGGGGACAG CCTCGCACGC CCTCGGTACG GCACGCTGTG CTGAGCTGGA TTATCAGGAA GGTGCATTTA GTTCGCTGGC GCTGGTGTTA TGCGGGATTA TTACTTCGCT GATCGCACCG TTCCTTTTCC CGATTATTCT GGCAGTAATG GGCTAA
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Protein sequence | MMANIWWSLP LTLIVFFAAR KLAARYKFPL LNPLLVAMVV IIPFLMLTGI SYDSYFKGSE VLNDLLQPAV VALAYPLYEQ LHQIRARWKS IITICFIGSV VAMVTGTSVA LLMGASPEIA ASILPKSVTT PIAMAVGGSI GGIPAISAVC VIFVGILGAV FGHTLLNAMR IRTKAARGLA MGTASHALGT ARCAELDYQE GAFSSLALVL CGIITSLIAP FLFPIILAVM G
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