Gene EcSMS35_2288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2288 
Symbol 
ID6145061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2316510 
End bp2316908 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content49% 
IMG OID641617162 
Producthypothetical protein 
Protein accessionYP_001744335 
Protein GI170681362 
COG category[R] General function prediction only 
COG ID[COG1380] Putative effector of murein hydrolase LrgA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.00796393 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTAAGA CACTGAACAT TATCTGGCAA TATTTACGTG CTTTTGTCCT GATTTATGCC 
TGCCTGTATG CAGGCATTTT CATTGCTTCC CTGCTACCGG TAACCATTCC GGGCAGCATC
ATCGGGATGC TGATCCTGTT TGTCCTGCTG GCCTTGCAAA TTCTTCCGGC AAAATGGGTC
AATCCGGGGT GCTACGTACT GATTCGCTAT ATGGCGCTAT TGTTTGTGCC GATTGGCGTA
GGCGTCATGC AATATTTTGA TTTGCTCCGC GCACAGTTTG GCCCGGTAGT GGTTTCCTGT
GCAGTCAGTA CGCTGGTGGT TTTTCTGGTG GTGAGCTGGA GTTCGCAACT GGTGCACGGT
GAACGTAAAG TCGTAGGTCA GAAAGGATCA GAAGAATGA
 
Protein sequence
MSKTLNIIWQ YLRAFVLIYA CLYAGIFIAS LLPVTIPGSI IGMLILFVLL ALQILPAKWV 
NPGCYVLIRY MALLFVPIGV GVMQYFDLLR AQFGPVVVSC AVSTLVVFLV VSWSSQLVHG
ERKVVGQKGS EE