Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2288 |
Symbol | |
ID | 6145061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 2316510 |
End bp | 2316908 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641617162 |
Product | hypothetical protein |
Protein accession | YP_001744335 |
Protein GI | 170681362 |
COG category | [R] General function prediction only |
COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.00796393 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTAAGA CACTGAACAT TATCTGGCAA TATTTACGTG CTTTTGTCCT GATTTATGCC TGCCTGTATG CAGGCATTTT CATTGCTTCC CTGCTACCGG TAACCATTCC GGGCAGCATC ATCGGGATGC TGATCCTGTT TGTCCTGCTG GCCTTGCAAA TTCTTCCGGC AAAATGGGTC AATCCGGGGT GCTACGTACT GATTCGCTAT ATGGCGCTAT TGTTTGTGCC GATTGGCGTA GGCGTCATGC AATATTTTGA TTTGCTCCGC GCACAGTTTG GCCCGGTAGT GGTTTCCTGT GCAGTCAGTA CGCTGGTGGT TTTTCTGGTG GTGAGCTGGA GTTCGCAACT GGTGCACGGT GAACGTAAAG TCGTAGGTCA GAAAGGATCA GAAGAATGA
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Protein sequence | MSKTLNIIWQ YLRAFVLIYA CLYAGIFIAS LLPVTIPGSI IGMLILFVLL ALQILPAKWV NPGCYVLIRY MALLFVPIGV GVMQYFDLLR AQFGPVVVSC AVSTLVVFLV VSWSSQLVHG ERKVVGQKGS EE
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