Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2281 |
Symbol | macB |
ID | 6142654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2306613 |
End bp | 2308559 |
Gene Length | 1947 bp |
Protein Length | 648 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641617155 |
Product | macrolide transporter ATP-binding /permease protein |
Protein accession | YP_001744328 |
Protein GI | 170683653 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000297537 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.0300629 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCTT TGCTCGAATT AAAGGATATT CGTCGCAGCT ATCCTGCCGG TGATGAGCAG GTTGAGGTGC TGAAGGGCAT CAGCCTCGAT ATTTATGCCG GTGAGATGGT AGCGATTGTT GGCGCTTCGG GTTCCGGCAA ATCGACCCTG ATGAATATTC TCGGCTGCCT GGATAAGGCC ACCAGCGGCA CCTATCGCGT CGCCGGTCAG GATGTTGCCA CGCTGGACGC CGATGCGCTG GCGCAACTGC GCCGCGAGCA TTTCGGCTTT ATTTTCCAGC GTTACCATTT GCTTTCGCAT TTAACCGCCG AGCAGAACGT TGAAGTTCCC GCCGTCTATG CTGGTCTTGA GCGGAAACAG CGGCTGCTTC GCGCCCAGGA GTTGCTGCAA CGACTGGGGC TGGAAGACCG TACAGAGTAT TATCCGGCAC AGCTTTCGGG TGGTCAGCAA CAGCGTGTCA GCATCGCGCG GGCATTGATG AACGGCGGTC AGGTAATTCT TGCCGATGAA CCAACCGGTG CACTGGACAG CCATTCTGGC GAAGAGGTGA TGGCGATCCT GCATCAGCTG CGCGATCGCG GGCATACGGT GATTATCGTC ACCCACGATC CGCAGGTTGC TGCTCAGGCC GAGCGGGTGA TCGAAATTCG TGACGGCGAA ATTGTGCACA ATCCTCCCGC CGTTGAAAAA GTGAATGCTA CTGGCGGGAC GGAACCTGTT GTCAACACGG CGTCTGGCTG GCGGCAGTTT GTCAGCGGTT TTAACGAGGC GCTGACGATG GCATGGCGGG CGCTGGCAGC GAATAAAATG CGTACTTTAC TGACCATGCT GGGGATTATT ATCGGTATTG CGTCGGTGGT TTCCATTGTC GTGGTGGGCG ACGCCGCCAA ACAAATGGTG CTGGCGGATA TTCGTTCTAT TGGTACGAAT ACTATTGATG TCTATCCCGG GAAAGATTAT GGCGATGACG ATCCGCAATA TCAGCAGGCG CTGAAGTACG ACGACTTAAT CGCCATCCAA AAACAACCGT GGGTCGCCTC AGCCACACCT GCCGTCTCGC AAAACCTGCG CCTGCGTTAT AACAATGTTG ATGTGGCTGC CAGTGCCAAT GGCGTGAGCG GCGATTATTT TAATGTCTAT GGCATGACCT TCAGTGAAGG GAACACCTTT AATCAGGAGC AGCTGAACGG TCGTGCGCAG GTGGTGGTTC TCGACAGTAA TACTCGCCGC CAGCTTTTCC CCCATAAAGC AGATGTGGTT GGCGAGGTGA TTCTGGTCGG CAATATGCCC GCCAGAGTCA TTGGTGTGGC GGAAGAAAAA CAGTCGATGT TTGGTAGCAG TAAAGTGCTG CGTGTCTGGC TACCTTACAG CACGATGTCC GGGCGAGTTA TGGGCCAGTC GTGGCTGAAC TCCATTACTG TCAGGGTGAA AGAAGGATTT GACAGCGCCG AGGCGGAACA GCAACTCACG CGTTTACTTT CACTGCGCCA CGGTAAGAAG GATTTCTTTA CCTGGAACAT GGATGGTGTC TTGAAAACCG TTGAAAAGAC CACACGTACT TTACAACTGT TTCTGACGCT GGTGGCGGTG ATTTCGCTGG TGGTGGGCGG TATTGGTGTA ATGAATATTA TGCTGGTGTC AGTGACCGAG CGGACGCGGG AAATTGGCAT TCGCATGGCT GTAGGTGCGC GAGCAAGCGA TGTTTTGCAA CAGTTCCTGA TCGAAGCCGT ACTGGTTTGC CTGGTCGGTG GCGCGTTGGG AATAACACTG TCACTGTTAA TTGCTTTCAC CTTGCAGCTT TTCTTACCCG GCTGGGAGAT TGGTTTTTCA CCGTTGGCAC TGCTGCTGGC GTTTCTCTGC TCGACGGTCA CCGGGATTTT ATTTGGCTGG TTACCCGCAC GAAATGCGGC ACGACTGGAT CCAGTAGATG CTCTGGCACG AGAGTAA
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Protein sequence | MTPLLELKDI RRSYPAGDEQ VEVLKGISLD IYAGEMVAIV GASGSGKSTL MNILGCLDKA TSGTYRVAGQ DVATLDADAL AQLRREHFGF IFQRYHLLSH LTAEQNVEVP AVYAGLERKQ RLLRAQELLQ RLGLEDRTEY YPAQLSGGQQ QRVSIARALM NGGQVILADE PTGALDSHSG EEVMAILHQL RDRGHTVIIV THDPQVAAQA ERVIEIRDGE IVHNPPAVEK VNATGGTEPV VNTASGWRQF VSGFNEALTM AWRALAANKM RTLLTMLGII IGIASVVSIV VVGDAAKQMV LADIRSIGTN TIDVYPGKDY GDDDPQYQQA LKYDDLIAIQ KQPWVASATP AVSQNLRLRY NNVDVAASAN GVSGDYFNVY GMTFSEGNTF NQEQLNGRAQ VVVLDSNTRR QLFPHKADVV GEVILVGNMP ARVIGVAEEK QSMFGSSKVL RVWLPYSTMS GRVMGQSWLN SITVRVKEGF DSAEAEQQLT RLLSLRHGKK DFFTWNMDGV LKTVEKTTRT LQLFLTLVAV ISLVVGGIGV MNIMLVSVTE RTREIGIRMA VGARASDVLQ QFLIEAVLVC LVGGALGITL SLLIAFTLQL FLPGWEIGFS PLALLLAFLC STVTGILFGW LPARNAARLD PVDALARE
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