Gene EcSMS35_2246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2246 
Symbol 
ID6146227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2265074 
End bp2265550 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content58% 
IMG OID641617122 
ProductRadC family DNA repair protein 
Protein accessionYP_001744295 
Protein GI170682543 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGC TTTCCTTTCT GCCCGGAGAG ATGACGCCCG GCGAGCGCAG TCTCATTCTG 
CGGGCCCTGA AAACTCTGGA CCGCCATCTT CATGAACCCG GCGTGGCCTT CACCTCCACC
CGTGCGGCAC GGGAATGGCT GATTCTGAAC ATGGCGGGAC TGGAGCGTGA AGAATTCCGG
GTGCTGTATC TGAATAACCA GAATCAACTG ATTGCCGGTG AAACCCTCTT CACCGGCACC
ATCAACCGCA CGGAAGTCCA TCCCCGGGAA GTGATTAAAC GCGCCCTGTA CCACAATGCC
GCTGCCGTGG TGCTGGCGCA CAATCACCCG TCCGGTGAAG TCACACCCAG CAAGGCAGAC
CGCCTTATCA CGGAACGTCT GGTACAGGCA CTGGGCCTGG TGGATATCCG GGTGCCGGAC
CATCTGATAG TCGGTGGCAA CCAGGTTTTC TCCTTTGCCG AACATGGTCT GCTTTAA
 
Protein sequence
MQQLSFLPGE MTPGERSLIL RALKTLDRHL HEPGVAFTST RAAREWLILN MAGLEREEFR 
VLYLNNQNQL IAGETLFTGT INRTEVHPRE VIKRALYHNA AAVVLAHNHP SGEVTPSKAD
RLITERLVQA LGLVDIRVPD HLIVGGNQVF SFAEHGLL