Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2211 |
Symbol | |
ID | 6146392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2226227 |
End bp | 2226991 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641617087 |
Product | M48B family peptidase |
Protein accession | YP_001744261 |
Protein GI | 170680466 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000159617 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.373836 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAATA CTAAATTACT GCTGGCGATT GCGGCCTCTG CAGCTTTACT GACAGGGTGT CAGAATACCC ACGGTATTGA TACCAATATG GCTATCAGCT CAGGTTTAAA TGCCTATAAA GCAGCAACGT TAAGCGATGC TGATGCAAAA GCGATTGCCA ATCAGGGCTG TGCCGAAATG GACAGCGGCA ATCAAGTCGC AAGTAAATCC AGCAAGTACG GTAAACGTCT GGCAAAAATC GCCAAAGCAT TGGGTAACAA TATTAATGGC ACGCCGGTCA ACTATAAGGT TTATATGACC AGCGACGTCA ACGCATGGGC GATGGCGAAC GGCTGTGTTC GTGTCTACAG TGGCCTGATG GACATGATGA ACGACAACGA AATTGAAGGC GTTCTGGGTC ATGAACTGGG CCACGTCGCG TTGGGTCACT CGCTGGCTGA AATGAAAGCT TCTTATGCGA TCGTTGCCGC ACGTGATGCG ATTTCCGCTA CCAGCGGTGT GGCTTCCCAG CTTTCTCGCT CACAATTAGG TGATATCGCA GAAGGCGCTA TCAATGCGAA ATACTCCCGC GATAAAGAGT CCGAAGCAGA TGATTTCTCC TTTGATCTGT TGAAGAAACG TGGCATCAGC ACCCAGGGGC TGGTTGGCAG CTTTGAAAAA TTGGCCAGCC TGGATGGCGG TCGCACCCAG TCCATGTTTG ACTCTCACCC ACCATCAACA GAGCGTGCGC AACACATCCG TGATCGTATC GCCTCTGGTA AGTAA
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Protein sequence | MKNTKLLLAI AASAALLTGC QNTHGIDTNM AISSGLNAYK AATLSDADAK AIANQGCAEM DSGNQVASKS SKYGKRLAKI AKALGNNING TPVNYKVYMT SDVNAWAMAN GCVRVYSGLM DMMNDNEIEG VLGHELGHVA LGHSLAEMKA SYAIVAARDA ISATSGVASQ LSRSQLGDIA EGAINAKYSR DKESEADDFS FDLLKKRGIS TQGLVGSFEK LASLDGGRTQ SMFDSHPPST ERAQHIRDRI ASGK
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