Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2189 |
Symbol | pncB |
ID | 6143475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 2197090 |
End bp | 2198292 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641617065 |
Product | nicotinate phosphoribosyltransferase |
Protein accession | YP_001744239 |
Protein GI | 170682315 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
TIGRFAM ID | [TIGR01514] nicotinate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.084522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.514532 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAAT TCGCTTCTCC TGTTCTGCAC TCGTTGCTGG ATACAGATGC TTATAAGTTG CATATGCAGC AAGCCGTGTT TCATCACTAT TACGATGTGC ATGTCGCGGC GGAGTTTCGT TGCCGAGGTG ACGATCTGCT GGGTATTTAT GCCGATGCTA TTCGTGAACA GGTTCAGGCG ATGCAGCACC TGCGCCTGCA GGATGATGAA TATCAGTGGC TCTCTGCCCT GCCTTTCTTT CAGGCCGACT ATCTTAACTG GTTACGCGAG TTCCGCTTTA ACCCGGAACA AGTCACCGTA TCCAACGATA ATGGCAAGCT GGATATTCGT TTAAGCGGCC CGTGGCGTGA AGTCATCCTC TGGGAAGTTC CTTTGCTGGC GGTTATCAGT GAAATGGTAC ATCGCTATCG CTCACCGCAG ACCGACGTTG CGCAAGCCCT CGACACGCTG GAAAGCAAAT TAGTCGACTT CTCGGCATTA ACCGCCGGTC TTGATATGTC GCGCTTCCAT CTGATGGATT TTGGCACCCG CCGCCGTTTT TCTCGCGAAG TACAAGAAAC CATCGTTAAG CGTCTGCAAC AGGAATCCTG GTTCGTGGGC ACCAGCAACT ATGATCTGGC GCGCCGGCTT TCCCTCACGC CGATGGGAAC ACAGGCACAC GAATGGTTCC AGGCGCATCA GCAAATCAGC CCGGATCTAG CCAACAGCCA GCGAGCTGCA CTTGCTGCCT GGCTGGAAGA GTATCCCGAC CAACTTGGCA TTGCATTAAC CGACTGCATC ACTATGGATG CTTTCCTGCG TGATTTCGGT GTCGAGTTCG CCAGTCGCTA TCAGGGCCTG CGTCATGACT CTGGCGACCC GGTTGAATGG GGTGAAAAAG CCATTGCACA TTATGAGAAG CTGGGAATTG ATCCACAGAG TAAAACGCTG GTTTTCTCTG ACAATCTGGA TTTACGCAAA GCGGTTGAGC TATACCGCCA TTTCTCTTCC CGCGTGCAAT TAAGTTTTGG TATTGGGACT CGCCTGACCT GCGATATCCC CCAGGTAAAA CCCCTGAATA TTGTCATTAA GTTGGTTGAG TGTAACGGTA AACCGGTGGC GAAACTTTCT GACAGCCCTG GCAAAACTAT CTGCCACGAT AAAGCGTTTG TTCGGGCACT GCGCAAAGCA TTCGACCTTC CGCATATTAA AAAAGCCAGT TAA
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Protein sequence | MTQFASPVLH SLLDTDAYKL HMQQAVFHHY YDVHVAAEFR CRGDDLLGIY ADAIREQVQA MQHLRLQDDE YQWLSALPFF QADYLNWLRE FRFNPEQVTV SNDNGKLDIR LSGPWREVIL WEVPLLAVIS EMVHRYRSPQ TDVAQALDTL ESKLVDFSAL TAGLDMSRFH LMDFGTRRRF SREVQETIVK RLQQESWFVG TSNYDLARRL SLTPMGTQAH EWFQAHQQIS PDLANSQRAA LAAWLEEYPD QLGIALTDCI TMDAFLRDFG VEFASRYQGL RHDSGDPVEW GEKAIAHYEK LGIDPQSKTL VFSDNLDLRK AVELYRHFSS RVQLSFGIGT RLTCDIPQVK PLNIVIKLVE CNGKPVAKLS DSPGKTICHD KAFVRALRKA FDLPHIKKAS
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