Gene EcSMS35_2172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2172 
Symbol 
ID6146215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2180954 
End bp2181496 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content49% 
IMG OID641617049 
Producthypothetical protein 
Protein accessionYP_001744223 
Protein GI170683889 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000720846 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.548871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATTA AACCAGACGA TAACTGGCGT TGGTATTACG ATGAAGAGCA CGATCGAATG 
ATGCTCGATT TAGCCAATGG TATGCTATTT CGCTCACGTT TTGCGCGCAA AATGTTGACT
CCAGATGCCT TTTCTCCCGC AGGCTTTTGC GTTGACGACG CCGCGCTCTA TTTCTCATTT
GAAGAAAAAT GCCGCGATTT TAATTTATCT AAAGAACAAA AAGCCGAACT GGTGCTTAAT
GCGCTGGTAG CAATTCGTTA TCTCAAACCG CAAATGCCGA AAAGCTGGCA TTTTGTTTCC
CATGGTGAAA TGTGGGTGCC CATGCCGGGC GATGCGGCCT GCGTTTGGTT GAGCGACACT
CACGAGCAAG TCAATTTGCT GGTCGTTGAA TCTGGCGAAA ATGCCGCACT ATGCCTGCTG
GCACAACCCT GCGTTGTTAT AGCGGGTCGC GCGATGCAGC TGGGCGACGC CATCAAAATC
ATGAACGACA GGCTGAAACC GCAGGTTAAT GTTGACAGCT TCAGCCTCGA ACAGGCAGTT
TAA
 
Protein sequence
MRIKPDDNWR WYYDEEHDRM MLDLANGMLF RSRFARKMLT PDAFSPAGFC VDDAALYFSF 
EEKCRDFNLS KEQKAELVLN ALVAIRYLKP QMPKSWHFVS HGEMWVPMPG DAACVWLSDT
HEQVNLLVVE SGENAALCLL AQPCVVIAGR AMQLGDAIKI MNDRLKPQVN VDSFSLEQAV