Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2172 |
Symbol | |
ID | 6146215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2180954 |
End bp | 2181496 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641617049 |
Product | hypothetical protein |
Protein accession | YP_001744223 |
Protein GI | 170683889 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000720846 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.548871 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATTA AACCAGACGA TAACTGGCGT TGGTATTACG ATGAAGAGCA CGATCGAATG ATGCTCGATT TAGCCAATGG TATGCTATTT CGCTCACGTT TTGCGCGCAA AATGTTGACT CCAGATGCCT TTTCTCCCGC AGGCTTTTGC GTTGACGACG CCGCGCTCTA TTTCTCATTT GAAGAAAAAT GCCGCGATTT TAATTTATCT AAAGAACAAA AAGCCGAACT GGTGCTTAAT GCGCTGGTAG CAATTCGTTA TCTCAAACCG CAAATGCCGA AAAGCTGGCA TTTTGTTTCC CATGGTGAAA TGTGGGTGCC CATGCCGGGC GATGCGGCCT GCGTTTGGTT GAGCGACACT CACGAGCAAG TCAATTTGCT GGTCGTTGAA TCTGGCGAAA ATGCCGCACT ATGCCTGCTG GCACAACCCT GCGTTGTTAT AGCGGGTCGC GCGATGCAGC TGGGCGACGC CATCAAAATC ATGAACGACA GGCTGAAACC GCAGGTTAAT GTTGACAGCT TCAGCCTCGA ACAGGCAGTT TAA
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Protein sequence | MRIKPDDNWR WYYDEEHDRM MLDLANGMLF RSRFARKMLT PDAFSPAGFC VDDAALYFSF EEKCRDFNLS KEQKAELVLN ALVAIRYLKP QMPKSWHFVS HGEMWVPMPG DAACVWLSDT HEQVNLLVVE SGENAALCLL AQPCVVIAGR AMQLGDAIKI MNDRLKPQVN VDSFSLEQAV
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