| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2171 |
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| Symbol | rlmL |
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| ID | 6145620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2177642 |
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| End bp | 2179750 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641617047 |
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| Product | 23S rRNA m(2)G2445 methyltransferase |
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| Protein accession | YP_001744221 |
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| Protein GI | 170683350 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase
[COG1092] Predicted SAM-dependent methyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000766949 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.466381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCTC TGTTTGCCAG TACGGCCCGT GGGCTGGAAG AGCTGTTAAA AACTGAACTG
GAAAACCTGG GGGCCGTTGA ATGCCAGGTG GTTCAGGGTG GGGTCCATTT CAAGGGCGAC
ACACGGCTTG TTTACCAGAG CCTGATGTGG AGCCGCCTGG CCTCGCGTAT TATGTTGCCG
CTGGGCGAGT GTAAGGTTTA CAGCGATTTA GACCTCTATC TCGGTGTTCA GGCGATCAAC
TGGACAGAGA TGTTTAATCC TGGCGCGACC TTCGCTGTCC ACTTCAGTGG TTTGAATGAC
ACCATACGCA ACAGTCAGTA CGGTGCGATG AAAGTGAAAG ACGCGATCGT CGATGCTTTC
ACGCGGAAAA ATCTGCCGCG TCCAAATGTT GATCGCGATG CGCCGGATAT CCGCGTTAAC
GTCTGGCTGC ATAAAGAAAC TGCCAGTATC GCCCTTGATC TCAGTGGTGA TGGTTTACAT
CTGCGTGGCT ATCGCGATCG TGCTGGTATT GCGCCGATCA AAGAAACCCT GGCAGCCGCG
ATTGTTATGC GATCCGGCTG GCAGCCAGGA ACACCGCTGC TCGATCCGAT GTGTGGTTCC
GGTACGTTGC TGATTGAAGC GGCGATGCTG GCGACCGATC GCGCACCAGG CTTGCACCGT
GGACGTTGGG GCTTTAGCGG CTGGGCACAG CATGATGAAG CCATCTGGCA GGAAGTGAAA
GCAGAAGCGC AAACTCGCGC CCGTAAAGGC CTGGCGGAGT ACAGCTCCCA TTTCTACGGT
TCGGACAGCG ACGCACGGGT GATTCAACGT GCGCGCACTA ACGCCCGTCT TGCGGGGATT
GGTGAACTGA TCACCTTTGA GGTGAAAGAT GTCGCGCAAC TGGCCAATCC GCTGCCGAAA
GGGCCGTACG GTACAGTGTT GAGCAACCCG CCATACGGTG AACGTCTGGA CAGCGAACCG
GCGCTGATTG CGCTGCATAG TCTGCTGGGC CGAATCATGA AAAACCAGTT CGGTGGCTGG
AATCTCTCTT TGTTTAGTGC CTCGCCGGAT CTGCTCAGCT GCCTGCAGCT GCGTGCAGAC
AAACAGTACA AGGCGAAAAA CGGCCCGCTG GACTGCGTAC AGAAAAACTA CCATGTTGCC
GAAAGCACAC CAGACAGCAA ACCGGCGATG GCAGCGGAGG ACTACGCCAA CCGTCTGCGT
AAGAACCTCA AAAAATTCGA GAAGTGGGCT CGTCAGGAAG GAATTGAATG TTACCGCCTG
TATGACGCCG ATCTGCCGGA ATATAACGTT GCCGTTGACC GTTATGCCGA CTGGGTGGTG
GTGCAGGAGT ATGCGCCGCC AAAAACTATT GATGCGCACA AAGCGCGTCA GCGTCTGTTC
GATATTATCG CTGCAACCAT TTCGGTACTG GGGATTGCGC CAAACAAACT GGTACTGAAA
ACCCGTGAAC GCCAGAAGGG CAAAAATCAG TACCAGAAAC TGGGCGAGAA GGGCGAGTTT
CTCGAAGTCA CCGAATATAA CGCTCACTTG TGGGTGAACC TGACGGATTA CCTCGATACC
GGTCTGTTCC TCGATCACCG TATCGCCCGT CGTATGCTCG GTCAGATGAG CAAAGGCAAA
GATTTCCTCA ACCTGTTCTC TTATACCGGC AGCGCCACCG TGCACGCGGG ATTAGGCGGT
GCACGCAGCA CCACCACCGT GGATATGTCG CGTACTTATC TGGAGTGGGC AGAACGCAAC
CTGCGTCTGA ATGGCTTAAC CGGGCGTGCG CATCGCCTGA TTCAGGCCGA TTGCCTGGCG
TGGTTGCGTG AGGCAAATGA ACAGTTCGAT CTGATCTTTA TCGATCCGCC AACCTTTTCT
AACTCAAAAC GAATGGAAGA TGCGTTTGAT GTTCAGCGCG ATCATCTGGT GCTGATGAAA
GATTTGAAAC GTCTGCTGCG TGCAGGTGGG ACGATCATGT TCTCGAACAA CAAACGCGGC
TTCCGTATGG ATCTCGACGG CCTGGCGAAA CTGGGACTGA AAGCACAAGA AATTACGCAA
AAAACGCTCT CCCAGGATTT CGCCCGTAAC CGCCAGATCC ACAACTGCTG GCTGATTACC
GCAGCCTGA
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| Protein sequence | MNSLFASTAR GLEELLKTEL ENLGAVECQV VQGGVHFKGD TRLVYQSLMW SRLASRIMLP
LGECKVYSDL DLYLGVQAIN WTEMFNPGAT FAVHFSGLND TIRNSQYGAM KVKDAIVDAF
TRKNLPRPNV DRDAPDIRVN VWLHKETASI ALDLSGDGLH LRGYRDRAGI APIKETLAAA
IVMRSGWQPG TPLLDPMCGS GTLLIEAAML ATDRAPGLHR GRWGFSGWAQ HDEAIWQEVK
AEAQTRARKG LAEYSSHFYG SDSDARVIQR ARTNARLAGI GELITFEVKD VAQLANPLPK
GPYGTVLSNP PYGERLDSEP ALIALHSLLG RIMKNQFGGW NLSLFSASPD LLSCLQLRAD
KQYKAKNGPL DCVQKNYHVA ESTPDSKPAM AAEDYANRLR KNLKKFEKWA RQEGIECYRL
YDADLPEYNV AVDRYADWVV VQEYAPPKTI DAHKARQRLF DIIAATISVL GIAPNKLVLK
TRERQKGKNQ YQKLGEKGEF LEVTEYNAHL WVNLTDYLDT GLFLDHRIAR RMLGQMSKGK
DFLNLFSYTG SATVHAGLGG ARSTTTVDMS RTYLEWAERN LRLNGLTGRA HRLIQADCLA
WLREANEQFD LIFIDPPTFS NSKRMEDAFD VQRDHLVLMK DLKRLLRAGG TIMFSNNKRG
FRMDLDGLAK LGLKAQEITQ KTLSQDFARN RQIHNCWLIT AA
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