| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2168 |
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| Symbol | pqiB |
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| ID | 6146633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2172695 |
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| End bp | 2174335 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641617044 |
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| Product | paraquat-inducible protein B |
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| Protein accession | YP_001744218 |
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| Protein GI | 170683101 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3008] Paraquat-inducible protein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000764872 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.254429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCTA ATAATGGGGA AGCCAAAATC CAGAAAGTGA AGAACTGGTC TCCCGTGTGG
ATATTTCCTA TCGTCACGGC GCTCATTGGG GCCTGGGTTC TTTTTTATCA TTACAGCCAT
CAGGGGCCGG AAGTGACCCT GATCACCGCG AATGCGGAAG GAATAGAAGG TGGTAAAACC
ACCATTAAAA GCCGTAGCGT TGACGTCGGC GTGGTTGAAA GCGCCACACT GGCTGATGAT
TTGACGCACG TTGAAATCAA AGCGCGGCTG AATTCCGGTA TGGAAAAATT GCTGCATAAA
GATACCGTCT TTTGGGTGGT GAAACCGCAG ATTGGTCGAG AAGGGATTAG CGGCCTGGGA
ACGCTGCTGT CTGGGGTTTA TATCGAACTG CAGCCAGGCG CAAAAGGCAG CAAAATGGAT
AAATACGATT TGCTGGACTC GCCACCGTTG GCCCCGCCTG ATGCGAAAGG TATCCGTGTG
ATTCTCGATA GCAAAAAAGC CGGGCAGCTC TCGCCAGGAG ATCCCGTGCT GTTCCGTGGC
TATCGGGTAG GTTCGGTTGA AACCAGCACC TTCGATACGC AAAAACGCAA TATCAGCTAT
CAACTGTTCA TCAATGCACC TTATGACCGA CTGGTGACCA GCAATGTTCG CTTCTGGAAA
GATAGTGGCA TTGCGGTTGA TTTGACGTCA GCGGGAATGC GTGTGGAGAT GGGCTCATTG
ACAACGCTGC TTAGTGGCGG TGTCAGCTTT GATGTGCCGG AAGGTCTGGA TTTAGGGCAG
CCAGTGGCAC CGAAAACAGC TTTCGTTTTG TATGATGATC AGAAGAGCAT TCAGGATTCG
TTGTACACCG ATCACATTGA TTATCTGATG TTCTTTAAAG ATTCGGTACG CGGTCTGCAA
CCGGGAGCTC CGGTAGAATT CCGGGGTATT CGCCTGGGTA CCGTAAGCAA AGTGCCATTC
TTTGCGCCGA ATATGCGTCA GACATTTAAC GATGATTACC GTATTCCGGT ACTGATTCGT
ATCGAGCCAG AGCGGCTGAA AATGCAGCTT GGAGAAAATG CGGATGTTGT TGAGCACCTT
GGCGAATTGT TGAAACGTGG TTTACGCGGA TCGCTGAAAA CCGGAAACCT GGTCACTGGC
GCACTGTATG TTGATCTCGA TTTCTATCCA AATACGCCTG CAATAACCGG TATTCGTGAA
TTTAATGGTT ATCAGATTAT CCCGACCGTT AGCGGCGGTC TGGCGCAAAT CCAGCAACGA
CTGATGGAAG CGTTGGATAA GATCAACAAA CTGCCATTGA ATCCGATGAT TGAACAGGCA
ACCAGTACGC TTTCTGAAAG TCAGCGCACA ATGAAAAACC TGCAAACGAC GCTGGATAGC
ATGAACAAGA TCCTCGCCAG CCAGTCGATG CAGCAGTTAC CGACGGATAT GCAGTCAACG
TTGCGTGAAT TGAATCGCAG TATGCAGGGC TTCCAGCCTG GCTCCGCAGC CTACAACAAG
ATGGTGGCGG ATATGCAGCG ACTTGATCAG GTGTTGCGAG AACTGCAACC GGTGCTGAAA
ACGCTCAACG AGAAGAGTAA CGCGCTGGTA TTTGAAGCGA AGGACAAAAA AGATCCAGAG
CCGAAGAGGG CGAAACAATG A
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| Protein sequence | MESNNGEAKI QKVKNWSPVW IFPIVTALIG AWVLFYHYSH QGPEVTLITA NAEGIEGGKT
TIKSRSVDVG VVESATLADD LTHVEIKARL NSGMEKLLHK DTVFWVVKPQ IGREGISGLG
TLLSGVYIEL QPGAKGSKMD KYDLLDSPPL APPDAKGIRV ILDSKKAGQL SPGDPVLFRG
YRVGSVETST FDTQKRNISY QLFINAPYDR LVTSNVRFWK DSGIAVDLTS AGMRVEMGSL
TTLLSGGVSF DVPEGLDLGQ PVAPKTAFVL YDDQKSIQDS LYTDHIDYLM FFKDSVRGLQ
PGAPVEFRGI RLGTVSKVPF FAPNMRQTFN DDYRIPVLIR IEPERLKMQL GENADVVEHL
GELLKRGLRG SLKTGNLVTG ALYVDLDFYP NTPAITGIRE FNGYQIIPTV SGGLAQIQQR
LMEALDKINK LPLNPMIEQA TSTLSESQRT MKNLQTTLDS MNKILASQSM QQLPTDMQST
LRELNRSMQG FQPGSAAYNK MVADMQRLDQ VLRELQPVLK TLNEKSNALV FEAKDKKDPE
PKRAKQ
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