Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2167 |
Symbol | |
ID | 6145752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2172135 |
End bp | 2172698 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641617043 |
Product | putative lipoprotein |
Protein accession | YP_001744217 |
Protein GI | 170682434 |
COG category | [S] Function unknown |
COG ID | [COG3009] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000482452 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.394753 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGT GGCTAGTGAC GATTGCAGCA CTGTGGCTGG CCGGATGCAG CTCCGGCGAA ATTAATAAAA ACTATTACCA GTTACCTGTG GTGCAGGGCG GTACACAAAG TACCGCCAGC CAGGGTAATC GCCTGTTATG GGTAGAGCAG GTCGCTGTTC CTGACTATCT GGCGGGAAAT GGTGTGGTTT ATCAAACCAG TGATGTGAAG TATGTGATTG CCAACAACAA CTTGTGGGCC AGCCCGTTGG ATCAACAGTT GCGCAACACT CTGGTTGCCA ACCTGAGCAC GCAACTGCCC GGCTGGGTGG TTGCCTCCCA GCCTCTGGGA AGCGCCCAGG ATACGCTCAA TGTTACCGTA ACGGAGTTTA ACGGGCGATA TGATGGCAAG GTCATTGTCA GTGGTGAATG GCTGTTGAAC CACCAGGGAC AACTGATCAA ACGTCCGTTC CGTCTGGAAG GGGTGCAAAC TCAGGATGGT TACGATGAGA TGGTTAAAGT ACTGGCCAGT GTCTGGAGTC AGGAAGCCGC TTCTATTGCG CAAGAGATAA AGCGTCTACC TTAA
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Protein sequence | MKKWLVTIAA LWLAGCSSGE INKNYYQLPV VQGGTQSTAS QGNRLLWVEQ VAVPDYLAGN GVVYQTSDVK YVIANNNLWA SPLDQQLRNT LVANLSTQLP GWVVASQPLG SAQDTLNVTV TEFNGRYDGK VIVSGEWLLN HQGQLIKRPF RLEGVQTQDG YDEMVKVLAS VWSQEAASIA QEIKRLP
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